PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00843_0030 | ||||||||
Common Name | KFL_008430030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | E2F/DP | ||||||||
Protein Properties | Length: 474aa MW: 51581.3 Da PI: 4.406 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85 | 6e-27 | 175 | 240 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt++f++l++++ +g+v+ln++a++L +v ++RRiYDi+NVLe+++liekk+kn+i wkg kfl00843_0030 175 RYDQSLGLLTKRFIDLIKQAVDGVVDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKSKNNILWKG 240 689*******************************...99..****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 1.2E-27 | 173 | 241 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM01372 | 2.7E-34 | 175 | 240 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
SuperFamily | SSF46785 | 3.99E-17 | 175 | 238 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF02319 | 4.0E-24 | 177 | 240 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
CDD | cd14660 | 2.10E-38 | 251 | 353 | No hit | No description |
SuperFamily | SSF144074 | 1.75E-28 | 252 | 352 | No hit | No description |
Pfam | PF16421 | 1.9E-29 | 256 | 350 | IPR032198 | E2F transcription factor, CC-MB domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008284 | Biological Process | positive regulation of cell proliferation | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0010090 | Biological Process | trichome morphogenesis | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0051302 | Biological Process | regulation of cell division | ||||
GO:0051446 | Biological Process | positive regulation of meiotic cell cycle | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005667 | Cellular Component | transcription factor complex | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence Send to blast |
MATQSKSAGP VQTQIGGLAQ PRQMAAQPQF QQMTFDHNRP AFAAPEEYHQ FQEGGQGPGF 60 QPQGHPQEVL YARFPDNMMQ SPPATSHPGA KRMAVKSEGA DQGLRDQWGG ANGIDYNMAV 120 TPLQQAPQQR GGGRGNQRGS AARRLSTGPV TPAEQMSFGS PPSASQQTPG SSCSRYDQSL 180 GLLTKRFIDL IKQAVDGVVD LNKAAETLQV QKRRIYDITN VLEGIGLIEK KSKNNILWKG 240 AAGTTTVESL DETAQLQAEL DHLQQQEMAL DEQIQMMRER VAAFQEDEHS KQWLYVTEQD 300 IKSLPGFERE TLIAIKAPPG TEVEAPNVED TGNYQIILRS TAGPIDVYLV SRHEPDLEEM 360 QTDDAHGAVA EPAQPRPVRP EEGAILREGA LLRDEAGMAE AAQMPTSPSR IRSLTAAEGE 420 DDYWLGSLDD GGVGPGIDEL FEEEPLDQSW GDLLVRPGSA MDIGTTLDQH PDVG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1cf7_A | 3e-23 | 169 | 240 | 1 | 73 | PROTEIN (TRANSCRIPTION FACTOR E2F-4) |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0U9HKN6 | 0.0 | A0A0U9HKN6_KLENI; Transcription factor E2F/dimerization partner |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1225 | 17 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36010.3 | 1e-71 | E2F transcription factor 3 |
Publications ? help Back to Top | |||
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