PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00843_0030
Common NameKFL_008430030
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family E2F/DP
Protein Properties Length: 474aa    MW: 51581.3 Da    PI: 4.406
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00843_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP856e-27175240171
        E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                    r+++sL+llt++f++l++++ +g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk+kn+i wkg
  kfl00843_0030 175 RYDQSLGLLTKRFIDLIKQAVDGVVDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKSKNNILWKG 240
                    689*******************************...99..****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.2E-27173241IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013722.7E-34175240IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467853.99E-17175238IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF023194.0E-24177240IPR003316E2F/DP family, winged-helix DNA-binding domain
CDDcd146602.10E-38251353No hitNo description
SuperFamilySSF1440741.75E-28252352No hitNo description
PfamPF164211.9E-29256350IPR032198E2F transcription factor, CC-MB domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010090Biological Processtrichome morphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051302Biological Processregulation of cell division
GO:0051446Biological Processpositive regulation of meiotic cell cycle
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MATQSKSAGP VQTQIGGLAQ PRQMAAQPQF QQMTFDHNRP AFAAPEEYHQ FQEGGQGPGF  60
QPQGHPQEVL YARFPDNMMQ SPPATSHPGA KRMAVKSEGA DQGLRDQWGG ANGIDYNMAV  120
TPLQQAPQQR GGGRGNQRGS AARRLSTGPV TPAEQMSFGS PPSASQQTPG SSCSRYDQSL  180
GLLTKRFIDL IKQAVDGVVD LNKAAETLQV QKRRIYDITN VLEGIGLIEK KSKNNILWKG  240
AAGTTTVESL DETAQLQAEL DHLQQQEMAL DEQIQMMRER VAAFQEDEHS KQWLYVTEQD  300
IKSLPGFERE TLIAIKAPPG TEVEAPNVED TGNYQIILRS TAGPIDVYLV SRHEPDLEEM  360
QTDDAHGAVA EPAQPRPVRP EEGAILREGA LLRDEAGMAE AAQMPTSPSR IRSLTAAEGE  420
DDYWLGSLDD GGVGPGIDEL FEEEPLDQSW GDLLVRPGSA MDIGTTLDQH PDVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1cf7_A3e-23169240173PROTEIN (TRANSCRIPTION FACTOR E2F-4)
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HKN60.0A0A0U9HKN6_KLENI; Transcription factor E2F/dimerization partner
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12251749
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.31e-71E2F transcription factor 3
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]