PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00836_0100 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | C2H2 | ||||||||
Protein Properties | Length: 191aa MW: 21391.2 Da PI: 10.3607 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.4 | 2.8e-06 | 23 | 47 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C C++sF+ k +L H+r+H kfl00836_0100 23 FVCDspGCSRSFTAKRYLSIHQRSH 47 899999******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.24E-5 | 20 | 49 | No hit | No description |
Gene3D | G3DSA:3.30.160.60 | 1.4E-7 | 21 | 47 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 11.489 | 23 | 52 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 25 | 47 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF54060 | 3.71E-10 | 58 | 162 | No hit | No description |
CDD | cd00085 | 0.0021 | 117 | 162 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MAAVTSTVGD KRKHSLVDSQ EEFVCDSPGC SRSFTAKRYL SIHQRSHSKT NAPLASLEGW 60 KQHFKYKHIF RIPDGRVWNT QLGSFQKGTR SDGYTALRIE GKVVKRHRLN FEIATGRAIK 120 PGMEIDHIVA SPRPTDGSDP PPQDDKWTNL QELTRAEHRR KTLVDNPGIH KKADSPGVHQ 180 GAEGLHISLV P |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IM54 | 3e-64 | A0A1Y1IM54_KLENI; Putative endonucleases | ||||
TrEMBL | A0A1Y1IQK2 | 5e-63 | A0A1Y1IQK2_KLENI; HNH nuclease |