PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00818_0030

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

C2H2

Protein Properties

Length: 979aa MW: 108779 Da PI: 10.3137

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00818_0030	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00073	47	66	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +Cp C k+F + +L++H r kfl00818_0030 47 TCPRCQKHFDTFQQLTNHRR 66 7*****************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	9.452	46	73	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 979 aa Download sequence Send to blast
MPNHFLNVLA PQLTISPTRA RSSWAGSDSR TAAVGAGGSP RARGRVTCPR CQKHFDTFQQ 60 LTNHRRGQDG CNPQLIPTGT RSPQRQFNAF SSAARREAGG SPLQDLPSPP PDQPSPQPDP 120 PLSQPDLASG GASPAAYEHA LSPEPRTSAV GQQEGPRFQE VRGTEQEGLQ AAASQSADDV 180 KRHAYVSFIK QCCGGKGLSR NDQNWLLSFA DVPGLKGAAD VQSYIDTLPQ PAGWKRVNLA 240 RANGKDGQDL FLDYCDAYEA VLGLWRDPAH SGKLILKPVL LRNKKGERVY KGAHSGVWWH 300 EMQKVIPLSD SVLALILYSD GTPLSLSGRQ KVRPVVLSLA NIPKELRGRF TGWVLVGYIP 360 YVEPRPELGL SENSDALRTR QLQIWHESYE TILRRLKLHT TTGLDVTDAS GSVTKVWPML 420 YAVVTDWQEG CVAAATKSGN KTKCPCHSCL VLSTELNDFA AGSQADPRTE EKMRQIYEQV 480 VRLHKKGGCQ EVISQLLKAW SVNPVQNAFW NWPGGNTEAG NPYLSILPEI MHQLDHGILP 540 QIFEAIGTYA RDKFGPREGN RLLAKANLRY RSFRNSHPGL RLPNIDFLGG SSFVTAFEHR 600 HCLSVAVFAV VGVFTLPNGR DEITTLLREV ANAYLDFGVR HRGSGHTDSS LEKVDESWAR 660 VLKMLRKVLP YQASDWGTSK VHTTVHLSPS VRLKGGSDEY HADIFESSHK STAKTPYRAS 720 NRFDMQLQMV KHVKDRLALR AAGADRFAAN VNERALRVRA VKQKSNLLSI KGRGIRLARL 780 SSHARAAGNW DSALRDQPEL VLLERALRAH LGGNRRGTQA LLENLPNVKD AKITRHLTLA 840 IARARQPDGR LKTELARANP SFGKKRRPLF NDVVVQGEEL GRNGGRVKVL WFAQLRLLFS 900 CTDHKGKKRA YAFVRWYQKT GPLDVTNCIR LKWEKVKGSD GREVDRYGVV GIQSIKRLEH 960 IIPDPNHENM YYVNAFRVV

Sequence ? help Back to Top

Protein Sequence Length: 979 aa Download sequence Send to blast

MPNHFLNVLA PQLTISPTRA RSSWAGSDSR TAAVGAGGSP RARGRVTCPR CQKHFDTFQQ  60
LTNHRRGQDG CNPQLIPTGT RSPQRQFNAF SSAARREAGG SPLQDLPSPP PDQPSPQPDP  120
PLSQPDLASG GASPAAYEHA LSPEPRTSAV GQQEGPRFQE VRGTEQEGLQ AAASQSADDV  180
KRHAYVSFIK QCCGGKGLSR NDQNWLLSFA DVPGLKGAAD VQSYIDTLPQ PAGWKRVNLA  240
RANGKDGQDL FLDYCDAYEA VLGLWRDPAH SGKLILKPVL LRNKKGERVY KGAHSGVWWH  300
EMQKVIPLSD SVLALILYSD GTPLSLSGRQ KVRPVVLSLA NIPKELRGRF TGWVLVGYIP  360
YVEPRPELGL SENSDALRTR QLQIWHESYE TILRRLKLHT TTGLDVTDAS GSVTKVWPML  420
YAVVTDWQEG CVAAATKSGN KTKCPCHSCL VLSTELNDFA AGSQADPRTE EKMRQIYEQV  480
VRLHKKGGCQ EVISQLLKAW SVNPVQNAFW NWPGGNTEAG NPYLSILPEI MHQLDHGILP  540
QIFEAIGTYA RDKFGPREGN RLLAKANLRY RSFRNSHPGL RLPNIDFLGG SSFVTAFEHR  600
HCLSVAVFAV VGVFTLPNGR DEITTLLREV ANAYLDFGVR HRGSGHTDSS LEKVDESWAR  660
VLKMLRKVLP YQASDWGTSK VHTTVHLSPS VRLKGGSDEY HADIFESSHK STAKTPYRAS  720
NRFDMQLQMV KHVKDRLALR AAGADRFAAN VNERALRVRA VKQKSNLLSI KGRGIRLARL  780
SSHARAAGNW DSALRDQPEL VLLERALRAH LGGNRRGTQA LLENLPNVKD AKITRHLTLA  840
IARARQPDGR LKTELARANP SFGKKRRPLF NDVVVQGEEL GRNGGRVKVL WFAQLRLLFS  900
CTDHKGKKRA YAFVRWYQKT GPLDVTNCIR LKWEKVKGSD GREVDRYGVV GIQSIKRLEH  960
IIPDPNHENM YYVNAFRVV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1IQU0	0.0	A0A1Y1IQU0_KLENI; Uncharacterized protein