PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00738_0030
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 448aa    MW: 49797.5 Da    PI: 6.4118
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00738_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00055136160223
                    EET...TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   2 kCp...dCgksFsrksnLkrHirtH 23 
                    kC+    C+  F r+++L+ H rtH
  kfl00738_0030 136 KCSyymGCNAAFARRDTLTLHERTH 160
                    6888889*****************9 PP

2zf-C2H213.80.00018166189122
                    EEET..TTTEEESSHHHHHHHHHH CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirt 22 
                    + C+   C++ Fsr++ Lk+H   
  kfl00738_0030 166 FACSeaGCDEAFSRSDALKTHVFY 189
                    679999***************865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.2E-10122157IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003553.7135160IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015713.131135165IPR007087Zinc finger, C2H2
SuperFamilySSF576678.68E-11146194No hitNo description
Gene3DG3DSA:3.30.160.601.2E-11158187IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.263166196IPR007087Zinc finger, C2H2
SMARTSM003550.027166191IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280168191IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MVGLLGLVQL VAERAPWAAE QARPLCCHRG HPSVLELGWE TLLGLEWGLR WGLQLVWVLD  60
SRLEVAEGGL VADLVAGSAV WVLDSRLEVA EGSVSLLAGV GESSVLSLEA GCGALLKRGD  120
TLLRHERTHN DEKALKCSYY MGCNAAFARR DTLTLHERTH SGIKPFACSE AGCDEAFSRS  180
DALKTHVFYY HTEKGQQRRK REEERIAKLL TTAGLPFKRE HHVTFDCLGG SFARIDFILD  240
HKGKIIVIEV DEYQHEGYGV ACDVARMLQI YEAWAIEGNS LPVHIIRYNP HTFQIDGKRA  300
AVTRKIREAR LLEAINEAAE MESEGLDQPR RRYHGRARSG NQVAPRRAFV GSGQGARREG  360
LSAELRRIKK ERELEAEMNP SPGPIPDPVI PDDPMHVDPI PALEVPNDPM QVDPQVAAQP  420
VVLQPSWTAK ERAYESTTDG PQAPQENR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2wbs_A4e-141101871185KRUEPPEL-LIKE FACTOR 4
2wbu_A4e-141101871286KRUEPPEL-LIKE FACTOR 4
4m9e_A4e-141101871084Krueppel-like factor 4
5ke6_A5e-141101871589Krueppel-like factor 4
5ke7_A5e-141101871589Krueppel-like factor 4
5ke8_A5e-141101871589Krueppel-like factor 4
5ke9_A5e-141101871589Krueppel-like factor 4
5kea_A4e-141101871589Krueppel-like factor 4
5keb_A4e-141101871589Krueppel-like factor 4
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1ISL50.0A0A1Y1ISL5_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48430.14e-09relative of early flowering 6