PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00706_0060
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB_related
Protein Properties Length: 668aa    MW: 73652.6 Da    PI: 7.6375
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00706_0060genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.3e-08610657348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 
                      +W++  +  lv+a k ++++   +W++I++ ++ g+t  qc  ++q+ +
    kfl00706_0060 610 AWSEGQEVALVKALKAFPKEtpaRWERIMQAVP-GKTKAQCFKKFQTMR 657
                      8********************************.************875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF465654.84E-2147184IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1102.8E-19103193IPR001623DnaJ domain
SMARTSM002712.8E-13105180IPR001623DnaJ domain
PfamPF002264.5E-17106185IPR001623DnaJ domain
CDDcd062575.46E-13106177IPR001623DnaJ domain
PROSITE profilePS5007618.166106188IPR001623DnaJ domain
PRINTSPR006254.4E-8111129IPR001623DnaJ domain
PRINTSPR006254.4E-8129144IPR001623DnaJ domain
PRINTSPR006254.4E-8160180IPR001623DnaJ domain
PROSITE patternPS006360165184IPR018253DnaJ domain, conserved site
PROSITE profilePS500905.053488541IPR017877Myb-like domain
SMARTSM007170.033492543IPR001005SANT/Myb domain
SuperFamilySSF466891.79E-7494539IPR009057Homeodomain-like
PROSITE profilePS500906.574603657IPR017877Myb-like domain
SuperFamilySSF466891.95E-8607656IPR009057Homeodomain-like
SMARTSM007174.7E-6607659IPR001005SANT/Myb domain
PfamPF002499.4E-6610656IPR001005SANT/Myb domain
CDDcd001678.05E-4611656No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    Send to blast
MSVPALMRRR GAGRLIAYDP AEVPKGGSAV VASCATPVKR LGQEPAGHSF HAAVLKYVEK  60
PGEEGDGEPL PEEEDAKLDD PAHVHPSSWE GTKKKKGSKG GEEQHDHYQL LGLGHLRYLA  120
NDDQIKKAYR ATSLKHHPDK QAAVLLDLGS EEEKDAKREE LDNHFKLIQE AYEVLTDPAK  180
RRLFDSIDEF DDDIPDACEP KDFYKVYGPV FQRNSRWSLQ QPCPLLGDDA TPHAQVDAFY  240
DFWFLFKSWR EFPQEDEYEL DQAEGREHKR WMERQNAKLR EKAKKEEVSR IRELVENAYK  300
RDPRVARMKE EEKKEKQKKK LAKQASKRAA EEEAARKVEE ERLAKEAAEA AAAEAAREEK  360
KQREKDKKLV RKERQRLRAA AGELAGAGKK VTAEELEELL TGFDLLGLRR VCDEVEAAGS  420
DEGKGVALRR GVQRLRDPQA VHDEPAAAGL SAAPAAEGKE TGAGTSGKGG ESPGGKAAGQ  480
SAGGAKAAAN TASRPWSSQE TALLKKALLK YPRGTRNRWE VVASMCGRSV DEVIATQKNE  540
LQKKPEDDKA FLAFLEQRKA PPEIKSPLTD RADVGDAPKS GVENGEKAGG GQTANGGASA  600
ANGAAASDDA WSEGQEVALV KALKAFPKET PARWERIMQA VPGKTKAQCF KKFQTMRESF  660
RAKKAEGE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A5e-201923055123Zuotin
5dje_B5e-201923055123Zuotin
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027076507.10.0dnaJ homolog subfamily C member 2-like
RefseqXP_027078876.10.0dnaJ homolog subfamily C member 2-like
RefseqXP_027178881.10.0dnaJ homolog subfamily C member 2-like
TrEMBLA0A1Y1INB50.0A0A1Y1INB5_KLENI; DnaJ protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP38231521
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06110.22e-81DnaJ domain ;Myb-like DNA-binding domain