PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00620_0080
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 540aa    MW: 60802.7 Da    PI: 9.0538
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00620_0080genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021931123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y C+ C+ +Fs+k +  rH rtH
  kfl00620_0080  9 YACTVCDVTFSQKGTRDRHERTH 31
                   89********************9 PP
2zf-C2H215.45.2e-053759123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C+ C+ +F +  +L+rH +tH
  kfl00620_0080 37 YTCTECDATFAQGGDLRRHNMTH 59
                   9******************9999 PP
3zf-C2H216.42.5e-056587123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y C+ C+ +F r   L+rH rtH
  kfl00620_0080 65 YACTECDATFARGGALRRHNRTH 87
                   89********************9 PP
4zf-C2H216.42.5e-0593115123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y+C+ C+ +F + + L +H+r+H
  kfl00620_0080  93 YVCTQCDATFAHGEGLWSHQRMH 115
                    9*********************9 PP
5zf-C2H215.16.7e-05121143123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y C  C+  F r s+L++H+rtH
  kfl00620_0080 121 YACIECDAKFARGSDLRSHQRTH 143
                    66779*****************9 PP
6zf-C2H213.80.00017149171123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y C+ C+ +F +   L+ H rtH
  kfl00620_0080 149 YACTECDATFAQGGGLQIHRRTH 171
                    89********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.17E-17355No hitNo description
Gene3DG3DSA:3.30.160.604.6E-13738IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015714.731936IPR007087Zinc finger, C2H2
SMARTSM003550.017931IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SMARTSM003550.00393759IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015715.4173764IPR007087Zinc finger, C2H2
PfamPF139120.0223759IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.0E-133958IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS0002803959IPR007087Zinc finger, C2H2
SuperFamilySSF576679.63E-2045102No hitNo description
Gene3DG3DSA:3.30.160.604.9E-155985IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015716.1246592IPR007087Zinc finger, C2H2
SMARTSM003550.00286587IPR015880Zinc finger, C2H2-like
PfamPF139121.7E-56588IPR007087Zinc finger, C2H2
PROSITE patternPS0002806787IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.607.1E-1386113IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015714.31693120IPR007087Zinc finger, C2H2
SMARTSM003550.008693115IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
SuperFamilySSF576671.32E-18101158No hitNo description
Gene3DG3DSA:3.30.160.601.3E-14114140IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.011121143IPR015880Zinc finger, C2H2-like
PfamPF139120.02121143IPR007087Zinc finger, C2H2
PROSITE profilePS5015716.145121148IPR007087Zinc finger, C2H2
PROSITE patternPS000280123143IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.608.8E-16141169IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.32E-17143195No hitNo description
PROSITE profilePS5015715.646149176IPR007087Zinc finger, C2H2
SMARTSM003550.0084149171IPR015880Zinc finger, C2H2-like
PfamPF139120.028149171IPR007087Zinc finger, C2H2
PROSITE patternPS000280151171IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.2E-11170202IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.697177205IPR007087Zinc finger, C2H2
SMARTSM003550.19177200IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280179200IPR007087Zinc finger, C2H2
SuperFamilySSF821991.5E-9336528No hitNo description
Gene3DG3DSA:2.170.270.104.7E-7409532No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MTHSGERPYA CTVCDVTFSQ KGTRDRHERT HTGERPYTCT ECDATFAQGG DLRRHNMTHT  60
GERPYACTEC DATFARGGAL RRHNRTHTGE RPYVCTQCDA TFAHGEGLWS HQRMHSGKRP  120
YACIECDAKF ARGSDLRSHQ RTHTGERPYA CTECDATFAQ GGGLQIHRRT HTGERPYACI  180
ECGAAFVTSD NQKKHFRDYH TAEGQQRRKR EEERVAKLLE GASIDFKREH AVSFRCILDT  240
FARVDFIIIL NGKVIVLEVD EYQHDGYGVA CDVSRMIKLY GAWLLEGNTL PVRFLRYNPH  300
LFRVDGKQKK LKRVVREDRL LRAIREASEA EGDGMRVWYL YYDVVAGKPA IMQDPAFTIG  360
PEASFRCDLT CERCSAQSAS GARCKRVVCI GLPYCWQHSW SVSHVTIKDD VHGKGLFAWA  420
PGGGHALVFR TGDPLVVYGG EHLATAQIDQ RYGPRTTAPY ALKIKQNHFV DAACKRGIGS  480
IANAPRGTNK KTTAEYAINN VTSTMRLKAT RPIYNGQEIL VGYGSGYWAG HKGSHRTRRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2i13_A3e-58220315188Aart
2i13_B3e-58220315188Aart
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IQ520.0A0A1Y1IQ52_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1524234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.27e-11C2H2 family protein