PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00619_0040
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C3H
Protein Properties Length: 1492aa    MW: 160687 Da    PI: 5.442
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00619_0040genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.34.8e-0713511372325
                     S---SGGGGTS--TTTTT-SS-S CS
        zf-CCCH    3 telCrffartGtCkyGdrCkFaH 25  
                     +++Crff+r G Ck+G rCk aH
  kfl00619_0040 1351 QRPCRFFQR-GNCKFGTRCKDAH 1372
                     79*******.*********9666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM002711.8E-19764IPR001623DnaJ domain
PROSITE profilePS5007614.637874IPR001623DnaJ domain
PRINTSPR006258.8E-101028IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1101.0E-171162IPR001623DnaJ domain
CDDcd062574.12E-151157IPR001623DnaJ domain
SuperFamilySSF465654.06E-161162IPR001623DnaJ domain
PfamPF002261.2E-151263IPR001623DnaJ domain
PRINTSPR006258.8E-102843IPR001623DnaJ domain
PRINTSPR006258.8E-104464IPR001623DnaJ domain
PROSITE profilePS5010315.62913481375IPR000571Zinc finger, CCCH-type
SMARTSM003560.006413501374IPR000571Zinc finger, CCCH-type
PfamPF006422.4E-413511372IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1492 aa     Download sequence    Send to blast
MVGLTKTRAA AVLGVSEDAE ETEIRTAFKK LALVWHPDKN KSPEATEKFK EINAAHKRMQ  60
QPDSEDEIEW DDDDDIVPFE QFMDLLSKLF ARQAAARRSP FGGGFGGGVF GGGGPSHAGG  120
SFGRSSFGGG PHVHFGGMGR GPGFVFVPTM SRSDSDSEYE TDSEEEDENW RYRRGEQRRA  180
EEQRRQEAAQ KRQQEAQRKQ AEAAERKKRE DEANQKRREE QEARRKAEIK AKHEAAEALK  240
RQKREEKARQ KERQVAGAKE REEQEAREKE EALAKEKEEQ ERRRREEQSR RDKAKAKEQA  300
EAAAQAHADA MAAEAAARRE KKKVQQPKPM RKRGLGKAGD EDEAEGSPAS SNPFAALKPD  360
SEPPKVKKAV KTRDLPPETN GDEVEPESEV PRVSAKASTA PRAAPTPVAP AVNGAAKVVT  420
PPPEVKPKAA PKVETAPVKQ KTPEEIAREK EEEKEKEARK KKSREEAARK RAEKVAYERM  480
MAEMEEKKRI EDEDRAMALR LQAEEERLAR IEAYQRQQRA KQQQEEAKRA ASRQVGARQA  540
PGSAFARPNG TAYATTAAAA AATAAAAPMP PSPSTQRQPD LGVSGPPFSS PSQPLHSPSE  600
TQPAGFGQRG FGAHAPASAF VEQPTGFVEQ PTGFVEQPTG FDGADNGPAA SEPLDPAVEA  660
VWKMEQDRVK AGRRLDEDQR RKADEQKRKK EEAERIEAER RRRAEDALLQ KAKLAGTGGK  720
KAPRRRRRGG GGVAGLDEAQ GWPGAEFAAG SSEWGGGSAG DEAPGEWEDV PGEGMVDDAE  780
FEEREREAEM LREEERQREE RKQAQQTQQK EEAGSEFDIN SILAEIASRA EQEHRASPTS  840
PLEAVSAASD GSPDVHVPSE KIHRPPPRYA PYQPLKQTAG LQQPNGMPAM RTEADILRET  900
WGQSHESSDA TTTTFSVHGG QESIPIDPMQ LSAYGGYPSS YASDSRVQAT PPSAGPPPQL  960
YPTSQVYPST QYPPQQQPLP TAYPGYYSSN SAPQGYKQPA AMYPASQPGY QGSAGPPPFS  1020
SGFGGTSQTY PQGGVGQFAT QQGGVGQFAR QQGAPQQMYG GQQEMGAHQY GWQGQYAGAG  1080
QASGLHSSGQ YTPSSDTPSP PDTSVTQPIR QGDSEYWVNE RADANGAENV DEYPPPGAAY  1140
DAVEQTLGSD LEPQADAYYQ EGEGGESSAQ AAAFGGTEQD SGYGNGYQDG EGWQNAPQES  1200
QQGWTAIPTG WGGEEEQQPV GGAASEYGGA GGYANGGGFA DGGAYQNPAA NGGYGEHEGR  1260
AQGGSASEYS SWGGGEAQQK QATGWGGENG GPQNGQHDDG AYNRQQQFEG PRQGKGGQGF  1320
EGFGRTWQRG SDSYSNASNG SGSPVAGGVG QRPCRFFQRG NCKFGTRCKD AHVAPGGLSR  1380
TPGPQDRTPA FHATSARDPP MQATGWGADS REEMDPSAGF GGYQKRGPQG GTARRGGFQN  1440
SGDVRKPGIY EADGEKPGNA HSGGLHSNAG GRRGYGGPQW QPRGAPPRRS PM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280285ERRRRE
2687702RKKEEAERIEAERRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IHE10.0A0A1Y1IHE1_KLENI; Chaperone protein