PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00565_0070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | MYB | ||||||||
Protein Properties | Length: 459aa MW: 49670 Da PI: 5.6626 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.9e-15 | 154 | 195 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT++Ed+ll+++v+++G+ W+++a+++ ++t kqc+ rwq+ kfl00565_0070 154 WTEDEDKLLYELVARFGTSKWSLVASKFE-NKTNKQCRRRWQT 195 *****************************.************7 PP | |||||||
2 | Myb_DNA-binding | 47.3 | 4.7e-15 | 203 | 246 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEd +l+++++ +G++ W+ Ia+ ++ gRt++ k+r++ kfl00565_0070 203 KGAWTAEEDNQLIEGHAFFGNR-WTDIAKLVP-GRTDNAAKNRYFA 246 79********************.*********.***********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.8E-16 | 144 | 196 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 16.269 | 146 | 197 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.64E-27 | 148 | 244 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 6.2E-11 | 150 | 199 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 2.9E-14 | 154 | 195 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 5.08E-13 | 154 | 195 | No hit | No description |
PROSITE profile | PS51294 | 20.649 | 198 | 252 | IPR017930 | Myb domain |
SMART | SM00717 | 5.8E-14 | 202 | 250 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 7.4E-14 | 203 | 247 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.1E-17 | 203 | 251 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 2.64E-11 | 205 | 248 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MADRWPQQDG RPDLPRTESG SDAGSDTHPK ASDDPIQSPL ASASSGGRAR GLAELPAVRE 60 VLLGTIDRPS PDLQALYQAS GTSVDELLEQ KKAIDCLASA SLINAGVQRQ KKGDSDPGRK 120 RSRSKAEEGH GGQEGGADLN DSGSEKPSKT TTIWTEDEDK LLYELVARFG TSKWSLVASK 180 FENKTNKQCR RRWQTCSNVM GAKGAWTAEE DNQLIEGHAF FGNRWTDIAK LVPGRTDNAA 240 KNRYFALLRK QAASAKAGKP SEEEGGSGLA VLSEDQQVDP RIASAILQAS PGARSELPGQ 300 KRNRPSDDFS AEEVEERVSP RFRGGAAEPS LGRLQGLFFP LEAGLEPGPQ FGQGLNLNLP 360 EARFLQQQKG AQEFRFRRPE GPQPGISFSR PEELPGYFPP REGLRQPHVD AAPLPVIPRP 420 DGAEGGAAGE GGDARQPRQE ASRKESLDLD LNSTPLKWL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1a5j_A | 8e-26 | 154 | 251 | 10 | 107 | B-MYB |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IG41 | 0.0 | A0A1Y1IG41_KLENI; MYB family transcription factor |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14350.2 | 8e-31 | MYB family protein |