PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00537_0090
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family G2-like
Protein Properties Length: 350aa    MW: 37163.2 Da    PI: 4.8495
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00537_0090genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.24.9e-30172225155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    +prl+Wtp+LH+rF +av++L G e+A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  kfl00537_0090 172 RPRLVWTPQLHKRFCDAVNHL-GVENAVPKTIMQLMNVEGLTRENVASHLQKYRL 225
                    59*******************.9*******************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-19170229IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-30171229IPR009057Homeodomain-like
TIGRFAMsTIGR015578.6E-24173225IPR006447Myb domain, plants
PfamPF002494.8E-8175224IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MDKEITRRWG VGIPSPEELA PLSTRLITPV LACAFNIEGD SGASLTEEEV DEAALNTVRG  60
GMERATPSQV SPQENPQVGP PLVGFADGRW DGGGADGAEG YPGEEPTNGV AILQGVHGNM  120
PAYGAFSGGV ENSQDGGGKK ARARPAESME GEDELEGMEH TSDDPPGRAL KRPRLVWTPQ  180
LHKRFCDAVN HLGVENAVPK TIMQLMNVEG LTRENVASHL QKYRLYLRQR FQTDAPAVPS  240
SSDAVFANGP QPPRGGGSAG PALSGGGEGD LGRERGLRMD TQSNGHSIGL TDGAPPQQDV  300
GYRDYGGYPA SMQLSGRPAP EPLEMDAFGR PLKRQKFVDQ RALAAHGQLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A5e-32172228157Transcription factor LUX
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00014PBMTransfer from AT3G46640Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IHL60.0A0A1Y1IHL6_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP11571753
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.32e-40G2-like family protein