PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00506_0040

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

bHLH

Protein Properties

Length: 501aa MW: 54092.9 Da PI: 7.7472

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00506_0040	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.2	1.1e-16	264	311	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h+++ErrRRdriN++f+ Lr+l+P +K +Ka++L+ +++Y++ Lq kfl00506_0040 264 TNHSAAERRRRDRINDRFDILRRLIPGT-----QKADKATVLKAVIDYVSRLQ 311 68***********************8.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	16.704	261	310	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.8E-14	264	311	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.2E-17	264	328	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.11E-16	264	323	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.7E-16	267	316	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF55021	8.24E-5	373	436	No hit	No description
CDD	cd04873	2.96E-7	376	438	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence Send to blast
MEGRSREGSL RRTMAEYGEV LDLDERKPGS GNWLDANASQ GGEDGQFANS FLYLEQASRM 60 DIPYGLAGGS GDFPPSDFNP DHLLNAGLSN DFLGGLEPLQ ILPPSTDAHE AGGLLHSNSW 120 RGIADYYVNN QGEQVEPLPE RYVLPQWVKD LRIGPGAVPT VNLKPPGGVL LKGLGTPLPP 180 SPRSIRAAVL GLPDLRGDVT PWGAEAFGGG EGDWRTRGAA ARVGGGDGAQ RREEDGAAAG 240 TPLPWASSPY YPASTPGRKL LSPTNHSAAE RRRRDRINDR FDILRRLIPG TQKADKATVL 300 KAVIDYVSRL QAAGADNLLQ KEATDEQTAS HPQQQAAMSE VYTPTVSARS PGWLSEEEEA 360 TSLQDKIAVD VRDQSYVVRI TCPTRGGLLF DVIATLKQLG LEVTDGELSS CRGRVLHVFY 420 VPIRNVSKEV IKAKLEAAVF PGRHQAVSSP PRLTAQLGLP KKEALVLPHE PPVQLHLPPK 480 TQRRVGAQGT TNRKRRLSGG Q

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence Send to blast

MEGRSREGSL RRTMAEYGEV LDLDERKPGS GNWLDANASQ GGEDGQFANS FLYLEQASRM  60
DIPYGLAGGS GDFPPSDFNP DHLLNAGLSN DFLGGLEPLQ ILPPSTDAHE AGGLLHSNSW  120
RGIADYYVNN QGEQVEPLPE RYVLPQWVKD LRIGPGAVPT VNLKPPGGVL LKGLGTPLPP  180
SPRSIRAAVL GLPDLRGDVT PWGAEAFGGG EGDWRTRGAA ARVGGGDGAQ RREEDGAAAG  240
TPLPWASSPY YPASTPGRKL LSPTNHSAAE RRRRDRINDR FDILRRLIPG TQKADKATVL  300
KAVIDYVSRL QAAGADNLLQ KEATDEQTAS HPQQQAAMSE VYTPTVSARS PGWLSEEEEA  360
TSLQDKIAVD VRDQSYVVRI TCPTRGGLLF DVIATLKQLG LEVTDGELSS CRGRVLHVFY  420
VPIRNVSKEV IKAKLEAAVF PGRHQAVSSP PRLTAQLGLP KKEALVLPHE PPVQLHLPPK  480
TQRRVGAQGT TNRKRRLSGG Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	269	274	ERRRRD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1IKT8	0.0	A0A1Y1IKT8_KLENI; Basic helix-loop-helix DNA-binding superfamily protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP557	16	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.1	7e-09	bHLH family protein