PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00479_0030
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family NF-X1
Protein Properties Length: 1007aa    MW: 108676 Da    PI: 8.1618
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00479_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X122.42.6e-07250268120
       zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                    CG H+C  lCH+GpCppCpq
  kfl00479_0030 250 CG-HTCRLLCHPGPCPPCPQ 268
                    **.****************8 PP
2zf-NF-X118.54.4e-06366385120
       zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                    CG+H C++lCH G+C+ Cp+
  kfl00479_0030 366 CGRHACERLCHGGKCGDCPL 385
                    ******************95 PP
3zf-NF-X117.77.8e-06473492120
       zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                    CG+H C++ C+ G+CppCp+
  kfl00479_0030 473 CGRHACKRRCCDGDCPPCPE 492
                    ******************96 PP
4zf-NF-X122.13.3e-07500518119
       zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                    CG+HkC ++CHeGpC pCp
  kfl00479_0030 500 CGNHKCPAPCHEGPCAPCP 518
                    ******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004381.7E-4250268IPR000967Zinc finger, NF-X1-type
PfamPF014222.0E-4250267IPR000967Zinc finger, NF-X1-type
CDDcd060081.00E-6292351No hitNo description
SMARTSM004380.24302332IPR000967Zinc finger, NF-X1-type
PfamPF0142253302310IPR000967Zinc finger, NF-X1-type
PfamPF014221.1320331IPR000967Zinc finger, NF-X1-type
CDDcd060089.86E-9356403No hitNo description
SMARTSM004388.5E-4366385IPR000967Zinc finger, NF-X1-type
PfamPF014220.0027366384IPR000967Zinc finger, NF-X1-type
CDDcd060081.09E-8410459No hitNo description
SMARTSM004380.06420440IPR000967Zinc finger, NF-X1-type
PfamPF014220.0032420439IPR000967Zinc finger, NF-X1-type
CDDcd060085.16E-9463511No hitNo description
SMARTSM004380.011473492IPR000967Zinc finger, NF-X1-type
PfamPF014220.0022473491IPR000967Zinc finger, NF-X1-type
CDDcd060083.28E-11490538No hitNo description
SMARTSM004384.7E-4500519IPR000967Zinc finger, NF-X1-type
PfamPF014221.1E-5500518IPR000967Zinc finger, NF-X1-type
SMARTSM0043822557578IPR000967Zinc finger, NF-X1-type
PfamPF014223.7567576IPR000967Zinc finger, NF-X1-type
SMARTSM00438180586604IPR000967Zinc finger, NF-X1-type
PfamPF0142296586595IPR000967Zinc finger, NF-X1-type
SMARTSM00438210668682IPR000967Zinc finger, NF-X1-type
PfamPF014220.0058668678IPR000967Zinc finger, NF-X1-type
CDDcd060081.58E-4753791No hitNo description
SMARTSM004380.21765783IPR000967Zinc finger, NF-X1-type
PfamPF014220.89766782IPR000967Zinc finger, NF-X1-type
CDDcd060086.05E-6821872No hitNo description
SMARTSM004384.5832853IPR000967Zinc finger, NF-X1-type
PfamPF014220.37833851IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009651Biological Processresponse to salt stress
GO:0009908Biological Processflower development
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042335Biological Processcuticle development
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000037Biological Processregulation of stomatal complex patterning
GO:0005634Cellular Componentnucleus
GO:0000987Molecular Functioncore promoter proximal region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1007 aa     Download sequence    Send to blast
MEPSGGHGAG SSSNQGAEAR TFAPASVNPW GRKPAQSTKQ NLASSQTSAS SPAEAKLSPK  60
PPTSFQTNNI NSRFGDISSS DEEDNNEERP DISRLEASIF GDYELGKGAD GDAGIEKIRD  120
HLISAQSGAA RCLICLEKIR ATDPIWDCQD SCYAIMHLLC IQSWARQSIA AVGLRNTASD  180
PLPSNAPAVV PKPKADANWH CPKCRHDYPS SHIPSAYRCF CGKEHNPSFN PWLPPHTCGE  240
TCGRPLESDC GHTCRLLCHP GPCPPCPQLV TARCFCGAGE DVRRCGRQEW ACGGMCGRKL  300
ACGKHSCKQT LLIHTSDVPQ PCHPGECPPC PEAGVFPCRC RKAAETRTCA QRDFSCGKKC  360
GRRLACGRHA CERLCHGGKC GDCPLSGVRV CPCGKTELGE LPCDVPTPTC GATCEKLLAC  420
GRHACPERCH VGPCVETCRV MTDKACRCGS LRKQVPCFQE LQCERRCQRQ RACGRHACKR  480
RCCDGDCPPC PEACGRRLRC GNHKCPAPCH EGPCAPCPVT VPIACACGGT TITVPCGTES  540
QVKPPRCSKP CPIPRRCRHS AEVPLHRCHY GNCPPCNMVC QEDLGCGHAC PKRCHGPHPP  600
PGPVYALRHT KKQKKVLEQE KSPEGSPCPP CQEPVSIPCL GAHSHKLVAC SAAAPFSCGE  660
PCGTALACGN HTCEKVCHVV MTSASVQNGG GDVADAGGAE SASQEHSLDS RPGGKGNGAL  720
PHETEEDATT PNGGLAAAAN TLDMPPPEPC EQCARKCSKP PTPPCIHACP RGCHPGPCPP  780
CTKLIRRKCH CEAGVALAIE CRELAAAERG GTGEWEKLLS CGNKCDRKLP LCAHTCQEVC  840
HAGACPHPEQ CRKKTNVRCP CRRQKKDWPC TDVRAAQAKS GNQTLELLSC DKECRKLAEQ  900
KKAADAAAAK KVNDEPREEQ SPRNAVEERP RGRKRGRRRD EAQEQRNLFS EDNAKLLVRA  960
SLWALYLLIA IIVVYVCVKL LARMDQYMKT TPPAKRRRPP QYYYNDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1928938RPRGRKRGRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IHN30.0A0A1Y1IHN3_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP63251718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.10.0sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors