PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00457_0070

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

HB-other

Protein Properties

Length: 1204aa MW: 130292 Da PI: 5.1773

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00457_0070	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.3	1.9e-06	248	299	4	52
-SS--HHHHHHHHHH..HHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeel..Fek.nrypsaeereeLAkklgLterqVkvWFqNrR 52 + +++++qle Le++ F + ps+++ LAk++gL+ + V WF +R kfl00457_0070 248 KERLSQQQLEMLESAlaFVGpQYRPSKDAYSSLAKRTGLSAECVEAWFEEKR 299 56799******96336677889**********************9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.1E-6	232	300	IPR009057	Homeodomain-like
PROSITE profile	PS50071	11.159	242	305	IPR001356	Homeobox domain
SMART	SM00389	0.0026	244	309	IPR001356	Homeobox domain
SuperFamily	SSF46689	4.28E-5	244	300	IPR009057	Homeodomain-like
CDD	cd00086	0.00155	245	300	No hit	No description
PROSITE profile	PS50812	8.647	1118	1181	IPR000313	PWWP domain
Pfam	PF00855	2.5E-6	1119	1203	IPR000313	PWWP domain
Gene3D	G3DSA:2.30.30.160	3.0E-8	1119	1204	No hit	No description
SuperFamily	SSF63748	4.39E-8	1119	1203	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1204 aa Download sequence Send to blast
MSQNVSWSEY MSQGAAWEES GLTNNDLDAR FSRIAVSQPQ PRKLSGLEKD SHLLSQNWQS 60 GGAGRTEGSE ASREVKMVSG LDENRFKVKE LQQILTAHML APGTRSKRET LDRMVGLQLF 120 SPFMESEGME EQNFPCPSVE ELQSDLRALG WFEGDFEEVE DLRRSVELQC RDSAGEGLQN 180 VPEDCPARWN RFKDENDRAE PEERSGTAAE LVPPVRSDST RAADEGSTLG FGQDIDSSAQ 240 IQPGRGSKER LSQQQLEMLE SALAFVGPQY RPSKDAYSSL AKRTGLSAEC VEAWFEEKRR 300 TAMEEDGASD ALGKDRQEAC DERKADPQRN NGGQADLLST VTSLERRLTD TNLTSGATSP 360 SNLDAVSSHV RPQPARPEDV GRGSGGNRTA EQEAVDLNLT PAHEAFLAGA FALMPVDDGT 420 LPEAACRSLA ARIGASEAAV TSFFRRFRSS SKDMQSTNPK ASPKNLQGLS HSSASATVPP 480 SEDSSSAAQQ RNLDQSAIDE AAQRKLLEEE ARAVESGSLS ASLRTVLENI KRFEAAGTQP 540 AGEKDVLRGK GRIGRKVAGV LVEDYESPNK DGTRDVLSAG VHVGTIIRLA GAAHDADLCE 600 RNCLDTHDFY IVRFVCSESP RQRTKQRACL DLKIDLHQRL RLLTWTDLRI MTLKHVRALP 660 DAWLLLARKT PLPPQPGAPA AAATPSVQVE PEPLLRPDAT RDSPFLQGAR SGADLVARAV 720 AIGSADATNA RARSEPEPSA QATRELLSSA RAGVADEARA EVESAAGAGA RAQEDTEPPL 780 GQPTLTMLVA RADARAYAQG GAQSPAGSGA AALEARQNMR WGDASEDGKA TEKANVWKGR 840 GKQTVLLNSK KPELVKKPPA RAPADPFAFT DQLLRGVEES ESARDRIKPA AIEGIPGPEV 900 ITGVSALLLA QAKEREAESH LARMTSESCH DASAIDAADA MVEDIVTQLG VDSTEPESQR 960 VFVPGSPPPI PPPAAVTWGW RSVMRNPVGK ELTSKAPGRH LETAEKDATV FQMQMASSEP 1020 VVTTAASPEL QSAPHNEPQR ASRFEEKQPE SLDDQSRPFP NPPERSAEDQ HGTDGISGPE 1080 RKRKAEDGRP LDPQNGWGER RARSGSVAEK SGSGRSGAED VVWVRSGGSW WPAQVITQES 1140 LSYKERQKLS ATSGDPLVRL FGKQPLTLSM PASRTLPFRQ HMKRFTSGRH SFDFHEAVQL 1200 ASEA

Sequence ? help Back to Top

Protein Sequence Length: 1204 aa Download sequence Send to blast

MSQNVSWSEY MSQGAAWEES GLTNNDLDAR FSRIAVSQPQ PRKLSGLEKD SHLLSQNWQS  60
GGAGRTEGSE ASREVKMVSG LDENRFKVKE LQQILTAHML APGTRSKRET LDRMVGLQLF  120
SPFMESEGME EQNFPCPSVE ELQSDLRALG WFEGDFEEVE DLRRSVELQC RDSAGEGLQN  180
VPEDCPARWN RFKDENDRAE PEERSGTAAE LVPPVRSDST RAADEGSTLG FGQDIDSSAQ  240
IQPGRGSKER LSQQQLEMLE SALAFVGPQY RPSKDAYSSL AKRTGLSAEC VEAWFEEKRR  300
TAMEEDGASD ALGKDRQEAC DERKADPQRN NGGQADLLST VTSLERRLTD TNLTSGATSP  360
SNLDAVSSHV RPQPARPEDV GRGSGGNRTA EQEAVDLNLT PAHEAFLAGA FALMPVDDGT  420
LPEAACRSLA ARIGASEAAV TSFFRRFRSS SKDMQSTNPK ASPKNLQGLS HSSASATVPP  480
SEDSSSAAQQ RNLDQSAIDE AAQRKLLEEE ARAVESGSLS ASLRTVLENI KRFEAAGTQP  540
AGEKDVLRGK GRIGRKVAGV LVEDYESPNK DGTRDVLSAG VHVGTIIRLA GAAHDADLCE  600
RNCLDTHDFY IVRFVCSESP RQRTKQRACL DLKIDLHQRL RLLTWTDLRI MTLKHVRALP  660
DAWLLLARKT PLPPQPGAPA AAATPSVQVE PEPLLRPDAT RDSPFLQGAR SGADLVARAV  720
AIGSADATNA RARSEPEPSA QATRELLSSA RAGVADEARA EVESAAGAGA RAQEDTEPPL  780
GQPTLTMLVA RADARAYAQG GAQSPAGSGA AALEARQNMR WGDASEDGKA TEKANVWKGR  840
GKQTVLLNSK KPELVKKPPA RAPADPFAFT DQLLRGVEES ESARDRIKPA AIEGIPGPEV  900
ITGVSALLLA QAKEREAESH LARMTSESCH DASAIDAADA MVEDIVTQLG VDSTEPESQR  960
VFVPGSPPPI PPPAAVTWGW RSVMRNPVGK ELTSKAPGRH LETAEKDATV FQMQMASSEP  1020
VVTTAASPEL QSAPHNEPQR ASRFEEKQPE SLDDQSRPFP NPPERSAEDQ HGTDGISGPE  1080
RKRKAEDGRP LDPQNGWGER RARSGSVAEK SGSGRSGAED VVWVRSGGSW WPAQVITQES  1140
LSYKERQKLS ATSGDPLVRL FGKQPLTLSM PASRTLPFRQ HMKRFTSGRH SFDFHEAVQL  1200
ASEA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1ICS9	0.0	A0A1Y1ICS9_KLENI; Uncharacterized protein