PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00368_0180
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 1891aa    MW: 203601 Da    PI: 8.8252
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00368_0180genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034718740123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C  Cgk F +   L  H++tH
  kfl00368_0180 718 FRCRTCGKGFETLQALGGHQKTH 740
                    89********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.12E-673129IPR009057Homeodomain-like
SuperFamilySSF541717.85E-7360420IPR016177DNA-binding domain
PROSITE profilePS5103210.744360419IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-8360419IPR001471AP2/ERF domain
SMARTSM003800.0019360425IPR001471AP2/ERF domain
PfamPF139129.0E-4686709IPR007087Zinc finger, C2H2
PROSITE profilePS501579.12687709IPR007087Zinc finger, C2H2
SuperFamilySSF576677.27E-8687740No hitNo description
SMARTSM003550.14687709IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280689709IPR007087Zinc finger, C2H2
PfamPF139127.1E-8717741IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.344718745IPR007087Zinc finger, C2H2
SMARTSM003550.042718740IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280720740IPR007087Zinc finger, C2H2
PROSITE profilePS501579.681772799IPR007087Zinc finger, C2H2
SMARTSM003553.4772794IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280774794IPR007087Zinc finger, C2H2
PROSITE profilePS501579.099890912IPR007087Zinc finger, C2H2
SMARTSM003550.061890912IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280892912IPR007087Zinc finger, C2H2
SuperFamilySSF576674.99E-610641087No hitNo description
PfamPF139126.8E-610641090IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.63510651092IPR007087Zinc finger, C2H2
SMARTSM003550.07210651087IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028010671087IPR007087Zinc finger, C2H2
SuperFamilySSF576674.99E-611511178No hitNo description
PfamPF139121.8E-511551179IPR007087Zinc finger, C2H2
SMARTSM003551.511561178IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.92811561183IPR007087Zinc finger, C2H2
PROSITE patternPS00028011581178IPR007087Zinc finger, C2H2
PROSITE profilePS501579.57715701597IPR007087Zinc finger, C2H2
SMARTSM003552.915701592IPR015880Zinc finger, C2H2-like
PfamPF139123.1E-415701594IPR007087Zinc finger, C2H2
PROSITE patternPS00028015721592IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1891 aa     Download sequence    Send to blast
MAGDDAAASE PPRVRRGSNF QVDISQLPIA RPKPARSTVW KPALHEDDPY WQRRDRFSKT  60
LPITEGPAHA LWPDYSIGST TWSIEEEKDF VLGIFLFEKN FKPISRFIGD GQQKNFIQCR  120
WYYYNKFKRA LHPLYHAFKL SSLQHSKEQH VRGSLMVLGN RGRKLLARLF HHVTDAKVQD  180
RIMDAHSKMA RNEMSLEKFV RLLRKHSSAA TLWAAFSIGQ EDDLSSCHYH LFAEKSSRRS  240
RLVANSRYRD CSTLEIQEEL AQMDIRATPT SQMSDLFHMG VWPRLERLGW HLETVHKGNG  300
RNMVYYCCPA LARFTKGAQR GVEYFDASRA LLSFVAHNLS VLDEKPETPT AYPSSNLDPQ  360
YQGVEKRGDR WRSYLMFEPE DGQSELVELG DFTTAERAAA AHDIAALKYI GHLAPRNFTH  420
DFEQDEGLAR MSATEAAAWL AEQAQLLPSP PAPPATSLRS PHPFSPPITP RPGALSGGFS  480
PCLSDPMKSP RMQRPAPLSL SQLLRVAAEA AGQGEASKGG PDEQAREGPQ EAWSPAALQL  540
SLGQRRAAQQ GGRGAYVEDG WTEQHAAASL VAAAVRPETT STQLSHQMAA IKLHSSDSIA  600
DGQAGNGIIR SSDIKVEGAL PAEVALCAEG THEGDPRHWW MQQFLEARAS MERRREGSPD  660
EDEWERGRRV SRKGSEGPEG PAGAGRHVCP DCGLSFESAQ QLGGHRVVHK RPAGSERFRC  720
RTCGKGFETL QALGGHQKTH QPAQRARLPR DDQETEAKGD GHSSRAPGPG WLQCPTCLDW  780
FKNGHALGGH QRVHGGQQFP PMKGIRSGPR PPPEINVFLV AREEKPVACA LEGDAGDDLD  840
DEEVLGEIIY RQPGDDSGDD DDMDDGEAGA GDAYGRRRAG RPRMKKAGKY QCRKCDATFP  900
TSRGRDGHQR MHGPSAGAVV RRGPSAEPYH DGAPYGPMAA GWGSDDADPT REAAPEPPPA  960
QYAQVNLATG EARADDRAAE EGGEGQPATV GPGAEEVGAG DMLPFTAARS RRMRKPRRFE  1020
SFEWQTDEWR REEKMDETAP PVGADGSGSD GDMESSGSER DAHVFACNEC TAVFPSARSL  1080
GSHRKLHRSE RRRRLEELRA MSEDGHYGSE VGPKAEPHAA GAPAERREAA EPHAKARALE  1140
VGREVYGGCI LANGRYRCNT CFKDFGTGQA LGGHQRIHSS GPTPAKKKAP KALAKPRKRA  1200
PTGTHPKEPH RAAFGRPLSA SGSRCVVPGR PAWMDDDDDE EAEEEVRMGG GGEGGWRNAA  1260
EESPVGTGRD VAQRWEATAG GGGAECEDSA ELLMAIHFQQ QERERERERG VAQRGITKPL  1320
AASPLGVKAR LGAAATAGSE PPQDVEMTVA SPTEKVAPAA AQPVAIGIGG PRPRAVAVGG  1380
AWHAAARLSA EWAENVPIGQ SSVFFPGRAQ TDTWPGGEKR KRVLSQLPGA SSPESSPANS  1440
PQATGPTPSR FHARPTAAHV PAPYRPASMG SPAGAGLSRY GAQALHGQPR GAPETGGRPD  1500
PRFLSTLTSS TSAAVTKVSY GMPPSDARQD ESTGPAKCFH AAMAQGRSLP ECLTRSPGVC  1560
LFQVGPARLH QCGECGAEFE TGAALGGHVG KHRRENEKLR EKEAHASDPP SREALRAGIM  1620
ARVGMSLTPR GGNVKAATAR HQAPKKRIMV KFQAQQQQHG PPHPAAPLAA HPAAPSSAYL  1680
RMPIAGLSQH PGGAVRLGPY SVPPSQLATG RAPLRLTVQV ATSPVVSPAR LVRSPTFGRD  1740
ALPRAAAATA SPDPTPRTRD VAALLQNWKA HTDTGGRGEP LQAARTCESP SRTPVRMVSR  1800
LAVPPALLTL PNGKADPEAA APKVLSPGNV NTAARAPMGP LQWEAKLAQR KAASPTGGCK  1860
GSSMPAGEGQ ARTPKARPTG ERAVNAPRSA T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
110831093RKLHRSERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.19e-12C2H2-like zinc finger protein