PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00355_0070
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family bHLH
Protein Properties Length: 396aa    MW: 42050.8 Da    PI: 6.8665
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00355_0070genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.62e-1281125554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    h ++E+rRR+riN+++e Lr+l+P++      + + a+ Le++ +YI+ L
  kfl00355_0070  81 HMAAEQRRRARINERLEALRSLVPHS-----ARANTAAFLEEVYDYISAL 125
                    889**********************6.....69**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.78976125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-1479132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.89E-1179130No hitNo description
SuperFamilySSF474591.83E-1380133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-1081125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-982131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MQDRMQSMQS PRLVAVGPIG PDMANAALLQ GHYPFMGSAQ QMQQVQQIFQ GQGMPYPHGM  60
QMNGKGHGGT GTRSGVCASR HMAAEQRRRA RINERLEALR SLVPHSARAN TAAFLEEVYD  120
YISALHKQLE RLGGGPFATP GPSPPTAMLD PPASKMANTG GATQLTGNKR ERSVSEESDM  180
QAGHHGLEEM TGNKSQFAPY LQAALLPGSL PGSPLFGAST APMVIPEMSL RSMMTEGLRP  240
VAPVAPMQQV MAPMQQQAMG QRPIGNGSMH NLLENGLQRM PSPLENGLQR MPSPVAEEQG  300
LGPQADDGKL AVAPGPSEEI APEGELLGSP QQERELSAEV EGTEGAGTSQ EEAAAEGELA  360
APKKRAKKSG PTVEMCGMKA RNVQGVHRPI PMKPQA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IH470.0A0A1Y1IH47_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13601747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-11BES1-interacting Myc-like protein 2