PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00334_0120
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family GATA
Protein Properties Length: 626aa    MW: 66426.8 Da    PI: 9.9659
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00334_0120genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA42.49.8e-14101135135
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                    C+ C   k+p WR gpdg+ktLCn CG+y++ +++
  kfl00334_0120 101 CAVCSLQKSPRWRTGPDGPKTLCNRCGVYWATMRH 135
                    999****************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011410.3395129IPR000679Zinc finger, GATA-type
SMARTSM004017.1E-995148IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.57E-1096137No hitNo description
Gene3DG3DSA:3.30.50.106.8E-1198133IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.66E-7100136No hitNo description
PfamPF003201.4E-11101135IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.40.105.0E-11571623IPR013083Zinc finger, RING/FYVE/PHD-type
SuperFamilySSF578503.3E-9571619No hitNo description
PfamPF139208.1E-13575620No hitNo description
PROSITE profilePS5008910.483576614IPR001841Zinc finger, RING-type
SMARTSM001847.1E-6576614IPR001841Zinc finger, RING-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 626 aa     Download sequence    Send to blast
MRQNTRLAIL AAELERQSPP ETSQPPPQNE GESSDGGVVQ TIPAVSLRGG APTRWKELGI  60
ETPDPRTPNP RTPIMSRSGP DSVQATPSTV PRSAPEGKRE CAVCSLQKSP RWRTGPDGPK  120
TLCNRCGVYW ATMRHKWDNL VARFKGDPSG KMRGTPSTDG GEDEGGTGTS VGKGRKPGKV  180
KPDPTPTPKN TRKRTTRTVP NPTPLAHGNG GPPFLDSATA NGLIAGGVAT RSGEHAPAAA  240
RQLELATEEK SKPPKKRWIE ELTETSPKRR SGQPVRWRAL SDEGDVAAND SPSGKRRRGG  300
GSDVGEEGGL RKEEASDAQK EEVTGVAKEV TGVGDEEAPA VRKEEALERD VRKEGRMQRG  360
LARVLEAANG GFDAGEPSPK AAPPKRRRTE LEGLLGAAKK EEAPGERRGG DGRLQRGLAR  420
VLEVERLANG DGEQDASLSL ESGEVAVRRR QGRRANGSDD VSGGLLLEED GDAGLARNRR  480
GKPPLGKGGG GKWELRPRPD SGHRSKGGES ESDSDAEGEK PGVKRKGGKG SLDGGVDNRP  540
NGKRGHSEDL NDAPRRVGNG ENGVNGRPRR DGSALCMVCG ESPREALFSP CGHFNFCYGC  600
ASQNLKEKGD CPKCGVKVTG VQKVVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1383389PKRRRTE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IGB30.0A0A1Y1IGB3_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.12e-09GATA transcription factor 4