PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00265_0090

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

MYB_related

Protein Properties

Length: 672aa MW: 72153.8 Da PI: 7.4129

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00265_0090	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.8	2.8e-09	230	273	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+r+Tt E l + +G++ W++Ia+++ gRt++++k+ w++ kfl00265_0090 230 RQRFTTAELHLVMQPQSFYGNK-WALIANHFK-GRTDNEVKNAWHT 273 89******************.****9.*******9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	8.98E-19	183	271	IPR009057	Homeodomain-like
SMART	SM00717	0.45	184	226	IPR001005	SANT/Myb domain
PROSITE profile	PS50090	5.819	185	224	IPR017877	Myb-like domain
Gene3D	G3DSA:1.10.10.60	1.7E-10	186	230	IPR009057	Homeodomain-like
CDD	cd00167	5.69E-6	187	224	No hit	No description
PROSITE profile	PS51294	15.902	225	279	IPR017930	Myb domain
SMART	SM00717	8.7E-4	229	277	IPR001005	SANT/Myb domain
Pfam	PF00249	2.5E-7	230	273	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	3.3E-15	231	276	IPR009057	Homeodomain-like
CDD	cd00167	8.74E-4	232	273	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence Send to blast
MIPALVLVIL EGHQDDEIVR LCRMGVLAYC TSVLAPGLPT FRLAIAQNSL SKELFVSYDW 60 GNNAARIAGA NTPGTKKGLQ HMILDLQPRH HSVEVLDVIK DELQRLALYY KHCQGSFTGN 120 PPGETAQDLL KAQYPGERCS VCQVLPGSVN LVARGLSGRT NDLVGEMKEA NPPPLEEGAP 180 EPMWKGAWTD VEDQVLRKHV ATNGEKDWKS VKGKSCRLRY MNHLRPNLKR QRFTTAELHL 240 VMQPQSFYGN KWALIANHFK GRTDNEVKNA WHTRRRQMER QRRKALEWEA AEQSGAGTAS 300 CGSDIVDGPA CATSSLCAMR AVHSHGSQEV FCAEHLPGAP IDVPAADYRA RGAMDVPVTC 360 TGPVLPDESY VGPGNPPFSQ WPDYPASDSC SPHLPANLLH LPSVPKTQSS SSLPIVHLCT 420 PVPYYCHVAT LERAASTGTE ASGGLVIDGP TVSSWAARSF AGDPAANGAW RAESACSAAA 480 EEKTWPPGGG RLENKRTTQS EPAPGASSPV PKPCALAPPR LVIPELDQHD ASWPDSIYLS 540 PIGALPALSP VVPSPPHSVD GFRPPNVLVG PQPQRGAESP GGLAPWTSAH FASSETGWRP 600 PAGDGLGGLL TSHGMVPLAP LQESAVLGGA LGTYPEWLVA APTGSLSYWT VQPMKPDTRT 660 KMVANLRRSR SV

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence Send to blast

MIPALVLVIL EGHQDDEIVR LCRMGVLAYC TSVLAPGLPT FRLAIAQNSL SKELFVSYDW  60
GNNAARIAGA NTPGTKKGLQ HMILDLQPRH HSVEVLDVIK DELQRLALYY KHCQGSFTGN  120
PPGETAQDLL KAQYPGERCS VCQVLPGSVN LVARGLSGRT NDLVGEMKEA NPPPLEEGAP  180
EPMWKGAWTD VEDQVLRKHV ATNGEKDWKS VKGKSCRLRY MNHLRPNLKR QRFTTAELHL  240
VMQPQSFYGN KWALIANHFK GRTDNEVKNA WHTRRRQMER QRRKALEWEA AEQSGAGTAS  300
CGSDIVDGPA CATSSLCAMR AVHSHGSQEV FCAEHLPGAP IDVPAADYRA RGAMDVPVTC  360
TGPVLPDESY VGPGNPPFSQ WPDYPASDSC SPHLPANLLH LPSVPKTQSS SSLPIVHLCT  420
PVPYYCHVAT LERAASTGTE ASGGLVIDGP TVSSWAARSF AGDPAANGAW RAESACSAAA  480
EEKTWPPGGG RLENKRTTQS EPAPGASSPV PKPCALAPPR LVIPELDQHD ASWPDSIYLS  540
PIGALPALSP VVPSPPHSVD GFRPPNVLVG PQPQRGAESP GGLAPWTSAH FASSETGWRP  600
PAGDGLGGLL TSHGMVPLAP LQESAVLGGA LGTYPEWLVA APTGSLSYWT VQPMKPDTRT  660
KMVANLRRSR SV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1h8a_C	2e-17	185	277	27	126	MYB TRANSFORMING PROTEIN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I7T8	0.0	A0A1Y1I7T8_KLENI; Myb domain protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35515.1	4e-27	high response to osmotic stress 10