PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00252_0110

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

DBB

Protein Properties

Length: 487aa MW: 52419.1 Da PI: 6.1409

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00252_0110	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.5	9.8e-07	34	66	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 ++kC+ ++e e+++ C +C +C C++ Hk kfl00252_0110 34 PPKCAVCKEAEAEFSCASCVASFCSPCWEVPHK 66 789**************************9995 PP
2	zf-B_box	18.4	4.7e-06	94	127	9	38
zf-B_box 9 HeekelqlfCedCqqllCedClleeHkg.....Ht 38 H+ k + +C +C+q lC+ C++ +H H+ kfl00252_0110 94 HG-KDAVGYCGECDQALCQVCWDLIHTKgtrvtHN 127 44.459********************555666676 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50119	8.617	32	78	IPR000315	B-box-type zinc finger
SMART	SM00336	0.059	32	78	IPR000315	B-box-type zinc finger
CDD	cd00021	0.00526	35	66	No hit	No description
SMART	SM00336	0.44	87	126	IPR000315	B-box-type zinc finger

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005622	Cellular Component	intracellular
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence Send to blast
MDFSATGAQD ADPRGRENEG SPEFAAGGVA KDPPPKCAVC KEAEAEFSCA SCVASFCSPC 60 WEVPHKWGDN QNHAKVVVEK PTCPCEGSFS VCPHGKDAVG YCGECDQALC QVCWDLIHTK 120 GTRVTHNLLA PLSRSDYRAE QLALQRAVKS GPLASLAKFD VKKAAPWVTS ALKKSRSVAD 180 AKRFGLGGAS RSTAAGSSRY AAIQLQTSKD AAAQLKAVCD EPGFGVQDDS TIKSYALDRQ 240 ADVLAVASAM KVVFETSPAG TDARNRTLCD KVDDYEKAIR IARASGKGVQ LSKDQRGERL 300 ERMTTTIALV QSQLDTLLKQ LNWKEGVAFL IRSPPYFDVL INLQTEAERA AKLAKDLGVR 360 IAKLGPGIVG ALLEAKEKEV AKAQKGKGTG VESTKKRTVK AGMVQQAKRK KIAGGPRGKG 420 GKAEANIQEM EELVKEMQAK LKKKKAAVQD IESSEEEPSE GDEEDEAEVE QEDNEGEREE 480 GEEEETN

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence Send to blast

MDFSATGAQD ADPRGRENEG SPEFAAGGVA KDPPPKCAVC KEAEAEFSCA SCVASFCSPC  60
WEVPHKWGDN QNHAKVVVEK PTCPCEGSFS VCPHGKDAVG YCGECDQALC QVCWDLIHTK  120
GTRVTHNLLA PLSRSDYRAE QLALQRAVKS GPLASLAKFD VKKAAPWVTS ALKKSRSVAD  180
AKRFGLGGAS RSTAAGSSRY AAIQLQTSKD AAAQLKAVCD EPGFGVQDDS TIKSYALDRQ  240
ADVLAVASAM KVVFETSPAG TDARNRTLCD KVDDYEKAIR IARASGKGVQ LSKDQRGERL  300
ERMTTTIALV QSQLDTLLKQ LNWKEGVAFL IRSPPYFDVL INLQTEAERA AKLAKDLGVR  360
IAKLGPGIVG ALLEAKEKEV AKAQKGKGTG VESTKKRTVK AGMVQQAKRK KIAGGPRGKG  420
GKAEANIQEM EELVKEMQAK LKKKKAAVQD IESSEEEPSE GDEEDEAEVE QEDNEGEREE  480
GEEEETN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	394	410	KKRTVKAGMVQQAKRKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I9F6	0.0	A0A1Y1I9F6_KLENI; Uncharacterized protein