PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00232_0220 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | C2H2 | ||||||||
Protein Properties | Length: 67aa MW: 7370.58 Da PI: 10.4413 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19 | 3.8e-06 | 36 | 58 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+ +F++ nL++H + H kfl00232_0220 36 QCPICKAPFTSYKNLVVHYESkH 58 7*****************99877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04419 | 1.4E-4 | 1 | 33 | IPR007513 | Uncharacterised protein family SERF |
SuperFamily | SSF118359 | 6.41E-22 | 1 | 65 | IPR026939 | At2g23090-like |
Gene3D | G3DSA:4.10.1050.10 | 2.3E-22 | 1 | 65 | IPR026939 | At2g23090-like |
PROSITE profile | PS50157 | 9.681 | 35 | 63 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF12907 | 1.5E-4 | 36 | 63 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 37 | 58 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 67 aa Download sequence Send to blast |
MARGKQKIES QKKNAEKNAP AKGSQLKAQA EALKVQCPIC KAPFTSYKNL VVHYESKHPK 60 ETPPPAP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001351425.1 | 2e-22 | uncharacterized protein LOC100500226 | ||||
Refseq | NP_001351509.1 | 2e-22 | uncharacterized protein LOC100306387 | ||||
Refseq | XP_020547950.1 | 4e-22 | zinc finger protein 706 | ||||
TrEMBL | A0A1Y1IBB4 | 4e-40 | A0A1Y1IBB4_KLENI; Uncharacterized protein | ||||
STRING | PP1S2_743V6.1 | 1e-22 | (Physcomitrella patens) |