PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00226_0130
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C3H
Protein Properties Length: 609aa    MW: 64642.7 Da    PI: 4.3067
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00226_0130genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.86.5e-1284108226
                    -S---SGGGGTS--TTTTT-SS-SS CS
        zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                    ++  C+f++rtG C+yG+ CkF H+
  kfl00226_0130  84 GEQKCSFYMRTGKCSYGSDCKFDHP 108
                    6678********************8 PP

2zf-CCCH29.99.3e-10131155226
                    -S---SGGGGTS--TTTTT-SS-SS CS
        zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                    +++ C +f+++GtCk+G++CkF H+
  kfl00226_0130 131 GQPHCAYFLKNGTCKFGSTCKFDHP 155
                    5677********************8 PP

3zf-CCCH38.22.4e-12197221327
                    S---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                    ++lC+ff++tG CkyG  CkF H++
  kfl00226_0130 197 EPLCQFFRKTGDCKYGVLCKFDHPE 221
                    79*********************96 PP

4zf-CCCH352.3e-11266291126
                    --S---SGGGGTS--TTTTT-SS-SS CS
        zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                    +++++C ++ rtGtC+yG++Ck++H+
  kfl00226_0130 266 PGQPECAYYIRTGTCQYGATCKYNHP 291
                    5789*********************9 PP

5zf-CCCH32.21.9e-10327350427
                    ---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     lC ++++tG Cky + CkF H+p
  kfl00226_0130 327 TLCAYYMKTGLCKYAPDCKFDHPP 350
                    69********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010314.17382110IPR000571Zinc finger, CCCH-type
SMARTSM003561.5E-582109IPR000571Zinc finger, CCCH-type
PfamPF006422.7E-984108IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.19E-585108IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.101.3E-488107IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.878129157IPR000571Zinc finger, CCCH-type
SMARTSM003566.9E-4129156IPR000571Zinc finger, CCCH-type
SuperFamilySSF902293.79E-5132155IPR000571Zinc finger, CCCH-type
PfamPF006422.1E-7132155IPR000571Zinc finger, CCCH-type
SMARTSM003566.8E-6194221IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.112194222IPR000571Zinc finger, CCCH-type
PfamPF006429.8E-10197221IPR000571Zinc finger, CCCH-type
SuperFamilySSF902296.54E-5197222IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.105.3E-5199220IPR000571Zinc finger, CCCH-type
SMARTSM003565.0E-5265292IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.765265293IPR000571Zinc finger, CCCH-type
PfamPF006423.6E-8267291IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.83E-5268292IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.107.2E-4271290IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.295323351IPR000571Zinc finger, CCCH-type
SMARTSM003562.3E-6323350IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.83E-5326350IPR000571Zinc finger, CCCH-type
PfamPF006423.0E-7327350IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.101.3E-4328348IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003723Molecular FunctionRNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MYVLREDTLQ SRYAVPSDRL QAQYYAGSGA GHYDESTLRA ASQRYYDEGS KRLRTTYPET  60
YQDPRSARYQ AHAAPTGGYP QRPGEQKCSF YMRTGKCSYG SDCKFDHPAW VPPEGIPGWK  120
EEEGEFPQRP GQPHCAYFLK NGTCKFGSTC KFDHPGAKPF AGRSVAAAPV ERLGLRSDVF  180
GTTAPMNSKG LPLRPSEPLC QFFRKTGDCK YGVLCKFDHP EPGSSKRKRA SDDDLQDVPL  240
YAVLPGSSYA GNAAPPARAV ALPQRPGQPE CAYYIRTGTC QYGATCKYNH PLPLSKRTEQ  300
TKAKPAKASP PAAGLTPAGL PRRPGATLCA YYMKTGLCKY APDCKFDHPP PGEAAKMAYR  360
AAAAEKAAPP AAGSAGGVPS KDQKVEEQSA AQTVENVAVG NTDGQGEAVR IEEKAPEEAE  420
KEGLAEQEGG GFEGEAWSPE AGVETEAEEG ADVVGGEHVS EGAVEGNAGA EQEAGAAEGE  480
TPAEAAEQGP VETAPTEAAE QGPVETALTE DAEKEAVLPS QAEVEQAIEN EAMQADEAEV  540
AQAAVPAEGP GTVEQEEQAG GENDGDELDF VDAEGLENED AEGYEGGLEH ESMLEGGVDL  600
NAEPTDEVE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I9820.0A0A1Y1I982_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP67541519
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.17e-53floral homeotic protein (HUA1)