PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00223_0040

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

C2H2

Protein Properties

Length: 351aa MW: 37941.5 Da PI: 6.5428

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00223_0040	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23	2.1e-07	243	264	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +CpdCgk F ++++L +H r+H kfl00223_0040 243 TCPDCGKGFASRHSLANHKRVH 264 7*******************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	8.1E-5	239	266	No hit	No description
SMART	SM00355	8.7E-4	242	264	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	11.884	242	264	IPR007087	Zinc finger, C2H2
Gene3D	G3DSA:3.30.160.60	5.3E-6	243	264	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE pattern	PS00028	0	244	264	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence Send to blast
MERASKYGRA LDTTDKLRAF LDALKSGLTG SNRSNLSRRN RLFADVGGSV TPGLMQYLDL 60 LEAAYDRRRG RPQGFCRAVC GTMVGWAEAE ERNGLEHEEL EAEMFSKWGK SGKGFSLVPE 120 ALQDAMRPEY KAAMEYAADY LLSDSGSSAL SSGLRVAKVL TGVYAIQDLD EDLADVMVED 180 LSSLDLPDGW RNYLRESRAE TEMTDTAPAA GAPAARRVPA RARGWPASAV FDVGGSSADD 240 RITCPDCGKG FASRHSLANH KRVHDSWLAK DVGSSSRGQK SGASAVDVDS DDDRTVRRVL 300 EKKAKFGSSR GDPAREKASP KNDVAADVAQ ALKAMLAKEI KAGARLLTEE V

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence Send to blast

MERASKYGRA LDTTDKLRAF LDALKSGLTG SNRSNLSRRN RLFADVGGSV TPGLMQYLDL  60
LEAAYDRRRG RPQGFCRAVC GTMVGWAEAE ERNGLEHEEL EAEMFSKWGK SGKGFSLVPE  120
ALQDAMRPEY KAAMEYAADY LLSDSGSSAL SSGLRVAKVL TGVYAIQDLD EDLADVMVED  180
LSSLDLPDGW RNYLRESRAE TEMTDTAPAA GAPAARRVPA RARGWPASAV FDVGGSSADD  240
RITCPDCGKG FASRHSLANH KRVHDSWLAK DVGSSSRGQK SGASAVDVDS DDDRTVRRVL  300
EKKAKFGSSR GDPAREKASP KNDVAADVAQ ALKAMLAKEI KAGARLLTEE V

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I2P1	0.0	A0A1Y1I2P1_KLENI; Uncharacterized protein