PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00212_0040
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family CO-like
Protein Properties Length: 568aa    MW: 60290.6 Da    PI: 5.0188
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00212_0040genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box27.28e-09160204442
       zf-B_box   4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 
                    + C+ ++  ++  +C  +  +lC+ C +e+H+       H++v+l
  kfl00212_0040 160 KLCQVCNASPAVVYCAADAACLCQPCDVEIHSAnalssrHERVSL 204
                    68*****************************66899999999875 PP
2CCT63.37.2e-22515559145
            CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                    R+++++RYkeKr+tR F KkirYe+RKa+Ae+RpR+KGrFvk++e
  kfl00212_0040 515 RKERVERYKEKRRTREFCKKIRYEVRKANAERRPRIKGRFVKRSE 559
                    9*****************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003361.3E-12157204IPR000315B-box-type zinc finger
PROSITE profilePS501199.371157204IPR000315B-box-type zinc finger
PfamPF006433.0E-7160204IPR000315B-box-type zinc finger
CDDcd000213.45E-10161204No hitNo description
PROSITE profilePS5101715.864515557IPR010402CCT domain
PfamPF062032.3E-16515557IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MQSPVTGPGP PVVVAQLPVT ESEAVQQTAI LAGAKVLSGS LPGLVSQVAR TSSGSHSAQV  60
VPTGKEDGIL SPVSLSFEGD LPIIPKLALP RLAKPASLMR TASADQEKHK AARRAPHVRI  120
APHPAGLAKL LGMDKLPEVE EGARETEESG TADGTVPIMK LCQVCNASPA VVYCAADAAC  180
LCQPCDVEIH SANALSSRHE RVSLLGVKDA VLCEAQAETG CVSAEHTVTL SSSSKSSRAK  240
RARTQGATSS GGSGEDLGMS PSSLDAQEVP SRWPGEEYSS YGGLTENDLI AMEMPDRGAQ  300
DSILESLGDE MCEMEESMEG IMYGIDGITA IPQLDLGSLG RSSGELRNGS EHADAGAGSD  360
SSSMGAGSMS HYDQYGPEVK YEYGLEGLQE MRHRGAEAEQ QASYESSYRL DDQAAFQLGL  420
RLGESNAGLD LAAGKGPKMG LSLDFSDILS AWSDKDVWAD GRYAQLVPDT GSPLDCLAPA  480
AYDHGVVPDL GSQRKREGGT YAGATTGDEG PVLNRKERVE RYKEKRRTRE FCKKIRYEVR  540
KANAERRPRI KGRFVKRSEC IAMGLSMF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I1W20.0A0A1Y1I1W2_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP8021649
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24790.17e-13CONSTANS-like 3