PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00209_0150 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | Trihelix | ||||||||
Protein Properties | Length: 213aa MW: 24207.2 Da PI: 8.9339 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 30.6 | 8.9e-10 | 26 | 107 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W+k+ + aL+e ++ + +rg+l +W+e+ + + + +++ +qC++k + l+krykk+k ++ + ++y+d+l kfl00209_0150 26 EWSKRATDALVESWGNKFLQQNRGNLTDLHWKEIEEEVnaqLNEAEKKTVIQCQNKVDGLKKRYKKEKVKPGG------TYWSYYDRL 107 5*************************************8776777799*******************998887......379999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 3.8E-17 | 25 | 109 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MSLTAQLANI GVVAAGSEDD KPVRGEWSKR ATDALVESWG NKFLQQNRGN LTDLHWKEIE 60 EEVNAQLNEA EKKTVIQCQN KVDGLKKRYK KEKVKPGGTY WSYYDRLGEL IGSQPKQRAP 120 APQHPQGGAG GKVVNMHHAP HQRSFREETA ALRHGLDNVA QAVREFAVLY ERVEAQKAQA 180 LVEHEEKRQN FERELEAMRM QVRLHAQAQG YQD |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00488 | DAP | Transfer from AT5G05550 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1I316 | 1e-156 | A0A1Y1I316_KLENI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP487 | 16 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14180.1 | 1e-20 | sequence-specific DNA binding transcription factors |