PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00175_0110 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | bHLH | ||||||||
Protein Properties | Length: 229aa MW: 25682.2 Da PI: 9.2441 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.3e-10 | 76 | 121 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rEr RR+r+ +f eL +ll + + +K +K++iL+ Av+ I +L kfl00175_0110 76 ADRERERRNRLHAKFMELSQLLDPG---RPPKTDKSTILTDAVRVIGQL 121 579*********************8...89****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.573 | 70 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.15E-12 | 76 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-8 | 76 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.6E-8 | 76 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.51E-7 | 77 | 126 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.2E-12 | 78 | 143 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MQDTAGDMFM GAWMDPSLMT PEPLLTGDQN AACQWQWPAF EKTEESGQSE KGPSCKKSGS 60 RKRQRGEQSV AAADKADRER ERRNRLHAKF MELSQLLDPG RPPKTDKSTI LTDAVRVIGQ 120 LRNEAEQLKE SNTQLRSSIK DLKVEKNELR EEKVRLKNDK DRLDLQVKTM MPPSFGLPQA 180 AMAAAFAAQQ QHKLQAPGQA AMGNFGMWQF LPPQVLDTSQ DHVLRPPAA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006447466.1 | 1e-56 | transcription factor ILR3 isoform X2 | ||||
Refseq | XP_006469731.1 | 1e-56 | transcription factor ILR3-like isoform X2 | ||||
Swissprot | Q9FH37 | 1e-54 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A1Y1HZI8 | 1e-167 | A0A1Y1HZI8_KLENI; Helix-loop-helix DNA-binding superfamily protein | ||||
STRING | XP_006469731.1 | 4e-56 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP755 | 17 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-41 | bHLH family protein |