PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00170_0020

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

C2H2

Protein Properties

Length: 1091aa MW: 120367 Da PI: 6.4876

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00170_0020	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.6e-05	930	951	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 CpdCg+++ + +L rH+++ H kfl00170_0020 930 CPDCGRPCAKRAELARHLKLaH 951 *******************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF81383	1.27E-10	838	920	IPR001810	F-box domain
Gene3D	G3DSA:1.20.1280.50	1.0E-8	851	922	No hit	No description
SMART	SM00355	0.15	928	951	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	10.034	928	956	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	930	951	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.23	955	980	IPR015880	Zinc finger, C2H2-like
SMART	SM00355	2.6	994	1017	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	8.663	994	1022	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	996	1017	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.75	1025	1051	IPR015880	Zinc finger, C2H2-like
SMART	SM00355	3.8	1058	1082	IPR015880	Zinc finger, C2H2-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1091 aa Download sequence Send to blast
MWHNGRLEWR MLISTPIPDF PTRASSYSVW REWYPSQRCP SVCRDYFKDG GCLDEDASFE 60 KREEEAKRRI DELIAKHEAI GNCEMCKPYE GYVVAETTAW LERMYALIAH IDAMPMAGLT 120 HFTSGCHKID GVIPPLHRLC RTNPPVWYPI SVEVLVNHKL LHAVTAQHKW FRRGRRWESV 180 RAVNSITEAM GEMEIAYPEM RDEVVKVVAK KIKAFAHAPQ GERLKESLQQ LLRCAARAHE 240 IKGQVMDAFV EGMVMASKER LQADKKKEKA DRDAKAAQLF TIRRASAGSV EMRIVSWVVN 300 AKKFANMWCE TEARQNSDFS AQLARSIAER LAVDPELWQL ANKTFVHIPS VASALWDLLP 360 DHPAYYRRGG NESISWVVRR RADAAPDDTN PFELVSVNSI AGAAAISTGV GGRVGENRGV 420 RAGEGTVNKR SKRGDAKALG GGRGPAVGAE SEGAERTKAE EVSVIVTRRN VGWWLTEGEE 480 WSEGGSGESP GGTSNGASSD EDSDGLAGGL AGEASDGDSD EESDDDVDED AAEAFGAFDE 540 GCQSLNGFMR EKEDPSVGCS ADGEKGTNDQ GSAEARPCSE GKELERGEGE GPMWGTDFPD 600 VGFDGTGQQF LREQAPGRED SLNGEVEWRS DWESVGEPSF GWEFGPRGSE RIGDPPEQNA 660 RCVNKGGGKK GGQQGKGSEL ASDLRSESED DSSMDWLGTS PVRKFKLQST GLGLLEGDAE 720 GGDKEEVGSK RLRGGLRDEE SREEKRRRLM EELAGFEDPD IDPEDLAGLK AAFVESVLAE 780 KPAEARKTAV RTAPTEKNTT AEKDAKEAET PAPPKRKRAD KPLKFGVKRP NLKKRKGDPP 840 EPVTGWGGID DNLLFTIVTR TDPRTTAVAA AVCKGWKEVC LSDELWAHHY RQRYGALPKE 900 QPLKKGGQSK LPWYKALVQR TQAPKSAVIC PDCGRPCAKR AELARHLKLA HTGGLQCELC 960 SETTRFRSAK GLEWHMREKH PEAGGEKPPP RQEMQCGLCH ARCKSQETLD KHVKLMHTER 1020 KKLEFVCGTP GCSFASRSQY ALKRHCTNTQ HAFPPPHLGC PRAGCDYRAY SQAEIRKHAY 1080 SHPSQCAECG E

Sequence ? help Back to Top

Protein Sequence Length: 1091 aa Download sequence Send to blast

MWHNGRLEWR MLISTPIPDF PTRASSYSVW REWYPSQRCP SVCRDYFKDG GCLDEDASFE  60
KREEEAKRRI DELIAKHEAI GNCEMCKPYE GYVVAETTAW LERMYALIAH IDAMPMAGLT  120
HFTSGCHKID GVIPPLHRLC RTNPPVWYPI SVEVLVNHKL LHAVTAQHKW FRRGRRWESV  180
RAVNSITEAM GEMEIAYPEM RDEVVKVVAK KIKAFAHAPQ GERLKESLQQ LLRCAARAHE  240
IKGQVMDAFV EGMVMASKER LQADKKKEKA DRDAKAAQLF TIRRASAGSV EMRIVSWVVN  300
AKKFANMWCE TEARQNSDFS AQLARSIAER LAVDPELWQL ANKTFVHIPS VASALWDLLP  360
DHPAYYRRGG NESISWVVRR RADAAPDDTN PFELVSVNSI AGAAAISTGV GGRVGENRGV  420
RAGEGTVNKR SKRGDAKALG GGRGPAVGAE SEGAERTKAE EVSVIVTRRN VGWWLTEGEE  480
WSEGGSGESP GGTSNGASSD EDSDGLAGGL AGEASDGDSD EESDDDVDED AAEAFGAFDE  540
GCQSLNGFMR EKEDPSVGCS ADGEKGTNDQ GSAEARPCSE GKELERGEGE GPMWGTDFPD  600
VGFDGTGQQF LREQAPGRED SLNGEVEWRS DWESVGEPSF GWEFGPRGSE RIGDPPEQNA  660
RCVNKGGGKK GGQQGKGSEL ASDLRSESED DSSMDWLGTS PVRKFKLQST GLGLLEGDAE  720
GGDKEEVGSK RLRGGLRDEE SREEKRRRLM EELAGFEDPD IDPEDLAGLK AAFVESVLAE  780
KPAEARKTAV RTAPTEKNTT AEKDAKEAET PAPPKRKRAD KPLKFGVKRP NLKKRKGDPP  840
EPVTGWGGID DNLLFTIVTR TDPRTTAVAA AVCKGWKEVC LSDELWAHHY RQRYGALPKE  900
QPLKKGGQSK LPWYKALVQR TQAPKSAVIC PDCGRPCAKR AELARHLKLA HTGGLQCELC  960
SETTRFRSAK GLEWHMREKH PEAGGEKPPP RQEMQCGLCH ARCKSQETLD KHVKLMHTER  1020
KKLEFVCGTP GCSFASRSQY ALKRHCTNTQ HAFPPPHLGC PRAGCDYRAY SQAEIRKHAY  1080
SHPSQCAECG E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	744	748	KRRRL
2	815	835	RKRADKPLKFGVKRPNLKKRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I5F1	0.0	A0A1Y1I5F1_KLENI; Uncharacterized protein