PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00160_0160 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | C2H2 | ||||||||
Protein Properties | Length: 692aa MW: 76376.1 Da PI: 4.5422 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00049 | 317 | 341 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt..H 23 + C CgksF++ + k+H ++ H kfl00160_0160 317 FYCVACGKSFKSEKQWKNHEKSrkH 341 78*****************997666 PP | |||||||
2 | zf-C2H2 | 11.4 | 0.00099 | 664 | 683 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C Cg+ F ++ +L +H+ kfl00160_0160 664 ECVTCGEEFDSRTQLFKHLT 683 7*****************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00271 | 1.0E-25 | 3 | 62 | IPR001623 | DnaJ domain |
SuperFamily | SSF46565 | 1.28E-24 | 3 | 82 | IPR001623 | DnaJ domain |
Gene3D | G3DSA:1.10.287.110 | 2.7E-26 | 3 | 85 | IPR001623 | DnaJ domain |
PROSITE profile | PS50076 | 19.825 | 4 | 70 | IPR001623 | DnaJ domain |
CDD | cd06257 | 1.36E-19 | 4 | 59 | IPR001623 | DnaJ domain |
Pfam | PF00226 | 4.5E-23 | 4 | 67 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 2.3E-15 | 6 | 24 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 2.3E-15 | 24 | 39 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 2.3E-15 | 42 | 62 | IPR001623 | DnaJ domain |
PROSITE pattern | PS00636 | 0 | 47 | 66 | IPR018253 | DnaJ domain, conserved site |
SuperFamily | SSF57667 | 1.11E-14 | 305 | 361 | No hit | No description |
SMART | SM00451 | 0.0045 | 314 | 348 | IPR003604 | Zinc finger, U1-type |
SMART | SM00355 | 0.37 | 317 | 341 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF12171 | 7.5E-11 | 317 | 341 | IPR022755 | Zinc finger, double-stranded RNA binding |
PROSITE profile | PS50157 | 9.702 | 317 | 346 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 319 | 341 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 8.3 | 663 | 687 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.411 | 663 | 692 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 665 | 687 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 692 aa Download sequence Send to blast |
MPRDLYDALE VARDASPDEL RVAYRRLALV WHPDKNAGRQ EEATVRFKEI QNAYEVLSDK 60 NERAWYDAHR EEILRGGSTH YAGAETGAPQ AEEGINLWAY FSTSAFSGYG DTGQGFYSVY 120 GKVFDEIAKN EMQAARRTGL DFSPLPSLGT FSSPYSAVSS FYSHWLNFTT VKEFLWAAEY 180 NLAAAPNRQV RRLMETENAK KVRAMRKKFN EEVRALAAWC KKRDKRVMER TLEQKKLQIL 240 FSDMKLQTFR ALSFSAALRE QEEARAHREK LARKKAEAAA MYVEQDWAVN EGAEKLTDEG 300 WWGDASKDKK EGGEEEFYCV ACGKSFKSEK QWKNHEKSRK HLERAAILKE ALLQEEEDAS 360 AASDDEIHDD FDTASEGADV SSAQDDISKG RGPVTDEEIL AELDAQEAER SRRSELETGE 420 EEARPPTEDS EAEGSVGDDE NGRSDGAEES GSEAESEDGL GDLMRMQQQR GSKGAEAASQ 480 GSDDGTVSED ASQESESEAE EDGAESGAED DDGLGDLLRL HKAQNGAVPR TKRGKRNTSE 540 AGKSDENVAE ERETEANDVE KVDEEPGATD VAPTGEESEG KANEVSAERD ATNETAEVSK 600 EENDETEAPQ RDTAKAKKAR RAANRAKKEG AQAAELAPDV TSARGRKGKK GKGSKAATAG 660 SQMECVTCGE EFDSRTQLFK HLTATGHAIP KR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2lgw_A | 8e-17 | 5 | 88 | 4 | 87 | DnaJ homolog subfamily B member 2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1I4W4 | 0.0 | A0A1Y1I4W4_KLENI; DnaJ heat shock family protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP3541 | 7 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74250.1 | 6e-65 | DNAJ heat shock N-terminal domain-containing protein |