PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00160_0160
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 692aa    MW: 76376.1 Da    PI: 4.5422
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00160_0160genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.00049317341123
                    EEETTTTEEESSHHHHHHHHHH..T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                    + C  CgksF++  + k+H ++  H
  kfl00160_0160 317 FYCVACGKSFKSEKQWKNHEKSrkH 341
                    78*****************997666 PP

2zf-C2H211.40.00099664683221
                    EETTTTEEESSHHHHHHHHH CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                    +C  Cg+ F ++ +L +H+ 
  kfl00160_0160 664 ECVTCGEEFDSRTQLFKHLT 683
                    7*****************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM002711.0E-25362IPR001623DnaJ domain
SuperFamilySSF465651.28E-24382IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1102.7E-26385IPR001623DnaJ domain
PROSITE profilePS5007619.825470IPR001623DnaJ domain
CDDcd062571.36E-19459IPR001623DnaJ domain
PfamPF002264.5E-23467IPR001623DnaJ domain
PRINTSPR006252.3E-15624IPR001623DnaJ domain
PRINTSPR006252.3E-152439IPR001623DnaJ domain
PRINTSPR006252.3E-154262IPR001623DnaJ domain
PROSITE patternPS0063604766IPR018253DnaJ domain, conserved site
SuperFamilySSF576671.11E-14305361No hitNo description
SMARTSM004510.0045314348IPR003604Zinc finger, U1-type
SMARTSM003550.37317341IPR015880Zinc finger, C2H2-like
PfamPF121717.5E-11317341IPR022755Zinc finger, double-stranded RNA binding
PROSITE profilePS501579.702317346IPR007087Zinc finger, C2H2
PROSITE patternPS000280319341IPR007087Zinc finger, C2H2
SMARTSM003558.3663687IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.411663692IPR007087Zinc finger, C2H2
PROSITE patternPS000280665687IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 692 aa     Download sequence    Send to blast
MPRDLYDALE VARDASPDEL RVAYRRLALV WHPDKNAGRQ EEATVRFKEI QNAYEVLSDK  60
NERAWYDAHR EEILRGGSTH YAGAETGAPQ AEEGINLWAY FSTSAFSGYG DTGQGFYSVY  120
GKVFDEIAKN EMQAARRTGL DFSPLPSLGT FSSPYSAVSS FYSHWLNFTT VKEFLWAAEY  180
NLAAAPNRQV RRLMETENAK KVRAMRKKFN EEVRALAAWC KKRDKRVMER TLEQKKLQIL  240
FSDMKLQTFR ALSFSAALRE QEEARAHREK LARKKAEAAA MYVEQDWAVN EGAEKLTDEG  300
WWGDASKDKK EGGEEEFYCV ACGKSFKSEK QWKNHEKSRK HLERAAILKE ALLQEEEDAS  360
AASDDEIHDD FDTASEGADV SSAQDDISKG RGPVTDEEIL AELDAQEAER SRRSELETGE  420
EEARPPTEDS EAEGSVGDDE NGRSDGAEES GSEAESEDGL GDLMRMQQQR GSKGAEAASQ  480
GSDDGTVSED ASQESESEAE EDGAESGAED DDGLGDLLRL HKAQNGAVPR TKRGKRNTSE  540
AGKSDENVAE ERETEANDVE KVDEEPGATD VAPTGEESEG KANEVSAERD ATNETAEVSK  600
EENDETEAPQ RDTAKAKKAR RAANRAKKEG AQAAELAPDV TSARGRKGKK GKGSKAATAG  660
SQMECVTCGE EFDSRTQLFK HLTATGHAIP KR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lgw_A8e-17588487DnaJ homolog subfamily B member 2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I4W40.0A0A1Y1I4W4_KLENI; DnaJ heat shock family protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP354177
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.16e-65DNAJ heat shock N-terminal domain-containing protein