PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00159_0100

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

HB-other

Protein Properties

Length: 1249aa MW: 135197 Da PI: 5.5294

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00159_0100	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.3e-09	885	917	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +e+e LA+ ++L+ q+ +WF N R + kfl00159_0100 885 HPYPSDQEKEALAEATNLQRGQIANWFINARVR 917 89*****************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00389	1.5E-8	861	925	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	2.8E-24	866	927	IPR009057	Homeodomain-like
SuperFamily	SSF46689	7.7E-16	867	928	IPR009057	Homeodomain-like
CDD	cd00086	9.68E-10	867	922	No hit	No description
Pfam	PF05920	4.7E-17	878	917	IPR008422	Homeobox KN domain
PROSITE profile	PS50071	11.402	880	921	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1249 aa Download sequence Send to blast
MQPGGFQGLD LEAVPDNAVW NARLDEFLRS RRLADPPADL TPSVLRRNTV VQSIAANAMD 60 RRADAQPSPL VQAGDVRMQG LPPSPISRPV GTRTPPLLDF DGFSWHRNSN TSGASLSAAM 120 AHPFVGALRD LQSLANGQEA ANHSIVSAPT FPGNTGSWEP VPGTDQLRVS PGHSPRSPRV 180 GPDFLIEAAA EYLREDRAER DESAVHTDPG PGTGLSLLSP FPSTDFPGKQ TTARGGDGKT 240 AKAKPLPATE SPRVSSLTSL YPVTPPGGEN TPRDSPTDRA PPNPLQHIDP PSAQSPSLLD 300 YYRLLAMRLP SDAPARLAAE LQELNPQTLH FASDFWAQLA AVRALQAHDP LSAVASSQFS 360 EPSLLALRSL LNFPYGPPAY GHVAHDKAAL RQQLAHQEAL ERHRLDLRAF ELQNQERRLA 420 EFYIPPSSPY AGIGPGDLAP STERAFFTDR RAGLAPESES FAGRKANKLA PRKASFSPRR 480 TDTDAERAGP QQRSPGQPSP LSASSPTGDA FLHNLLTSPP HSPLGLTGVA RAAEYASPVG 540 RDAEHLRYAL ADPGRWLEEE AVERPTRGGR EGPKASAVID LGGRRKSKRG HTEAEEEAEQ 600 TGVPQRERPR RKSARLSKSR TDVEEQLGLP SRSRSAGPDR LPVPAPLPAF DAPAGTEWVA 660 GKSKYMPALL HILEEINQLA LVSPERAEAE RAGLNRELVI RRNELESELE VSGADRQTLA 720 SEAEDLEALL VEVQTKKMEY LHENDVLGAQ FSASLGVAPH VAESYMKGPR EIVAGRFEEV 780 ERSLSADLER ARRQLGVMAR SRRPERNGPN KLDLRPPLAI GASGPAKGGR EMALAGPARH 840 MSVRELKERA RAFERGGARV GSGARGLSRT AVSILRGWLF DHFLHPYPSD QEKEALAEAT 900 NLQRGQIANW FINARVRVWK PMIEQMYKEQ KEKEAAEQTG AGPDQGPDSE EQLRLLDVGQ 960 RMRSEDEDFQ ESGEEEDSFG SPDELAHPRR RTNSPDVSAG RPITRAARRK DRRPSDPSEF 1020 PGGPFPGISE LEGPGNEIPS TNAPSGLAAK QAWPVEGRGG ESEFAESGQE AAEPAQENAG 1080 HGFLGEYGGD ELLGDILEQV PAEAEDAPAY PGGAETEHLL EGGQHDSARE KLPGEAPRRG 1140 RGKEGDQGAG KKGSGRQMVG SVEECEYAPG DSGVNTLSEG GDRRGFVGVW DEERGERHME 1200 IEGSGSPAEQ RGTFGRHGHS PEFVACQDLD MEKEAPELPR LSEKRGRFA

Sequence ? help Back to Top

Protein Sequence Length: 1249 aa Download sequence Send to blast

MQPGGFQGLD LEAVPDNAVW NARLDEFLRS RRLADPPADL TPSVLRRNTV VQSIAANAMD  60
RRADAQPSPL VQAGDVRMQG LPPSPISRPV GTRTPPLLDF DGFSWHRNSN TSGASLSAAM  120
AHPFVGALRD LQSLANGQEA ANHSIVSAPT FPGNTGSWEP VPGTDQLRVS PGHSPRSPRV  180
GPDFLIEAAA EYLREDRAER DESAVHTDPG PGTGLSLLSP FPSTDFPGKQ TTARGGDGKT  240
AKAKPLPATE SPRVSSLTSL YPVTPPGGEN TPRDSPTDRA PPNPLQHIDP PSAQSPSLLD  300
YYRLLAMRLP SDAPARLAAE LQELNPQTLH FASDFWAQLA AVRALQAHDP LSAVASSQFS  360
EPSLLALRSL LNFPYGPPAY GHVAHDKAAL RQQLAHQEAL ERHRLDLRAF ELQNQERRLA  420
EFYIPPSSPY AGIGPGDLAP STERAFFTDR RAGLAPESES FAGRKANKLA PRKASFSPRR  480
TDTDAERAGP QQRSPGQPSP LSASSPTGDA FLHNLLTSPP HSPLGLTGVA RAAEYASPVG  540
RDAEHLRYAL ADPGRWLEEE AVERPTRGGR EGPKASAVID LGGRRKSKRG HTEAEEEAEQ  600
TGVPQRERPR RKSARLSKSR TDVEEQLGLP SRSRSAGPDR LPVPAPLPAF DAPAGTEWVA  660
GKSKYMPALL HILEEINQLA LVSPERAEAE RAGLNRELVI RRNELESELE VSGADRQTLA  720
SEAEDLEALL VEVQTKKMEY LHENDVLGAQ FSASLGVAPH VAESYMKGPR EIVAGRFEEV  780
ERSLSADLER ARRQLGVMAR SRRPERNGPN KLDLRPPLAI GASGPAKGGR EMALAGPARH  840
MSVRELKERA RAFERGGARV GSGARGLSRT AVSILRGWLF DHFLHPYPSD QEKEALAEAT  900
NLQRGQIANW FINARVRVWK PMIEQMYKEQ KEKEAAEQTG AGPDQGPDSE EQLRLLDVGQ  960
RMRSEDEDFQ ESGEEEDSFG SPDELAHPRR RTNSPDVSAG RPITRAARRK DRRPSDPSEF  1020
PGGPFPGISE LEGPGNEIPS TNAPSGLAAK QAWPVEGRGG ESEFAESGQE AAEPAQENAG  1080
HGFLGEYGGD ELLGDILEQV PAEAEDAPAY PGGAETEHLL EGGQHDSARE KLPGEAPRRG  1140
RGKEGDQGAG KKGSGRQMVG SVEECEYAPG DSGVNTLSEG GDRRGFVGVW DEERGERHME  1200
IEGSGSPAEQ RGTFGRHGHS PEFVACQDLD MEKEAPELPR LSEKRGRFA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4xrm_A	4e-15	869	925	7	63	Homeobox protein Meis2
4xrm_B	4e-15	869	925	7	63	Homeobox protein Meis2

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	607	611	RPRRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I189	0.0	A0A1Y1I189_KLENI; Homeodomain protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP133	16	172

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-23	BEL1-like homeodomain 11