PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00150_0040

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

MYB

Protein Properties

Length: 1158aa MW: 122461 Da PI: 5.938

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00150_0040	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.9	1.8e-11	88	129	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W++ Ed l++ vk+ G+ W+++ r++g Rt+kqc++r+++ kfl00150_0040 88 KWSKKEDVVLLNFVKENGKAGWARVGRMLG--RTGKQCRNRFYN 129 8**************************8..*********9 PP
2	Myb_DNA-binding	24	9.1e-08	139	250	3	45
SS-HHHHHHHHHHHHHTTTT......................................................................-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg......................................................................tWkt 26 WT+eEd v+++k++G + +W+ kfl00150_0040 139 EWTAEEDRCMVELHKRFGCRlvfsqrnpeglqlhdlrlqkdvtglfftlpssfsfvsprrpgpqecckvilvlifqmssykvlsnssffsRWAI 232 7******************************************************************************************* PP HHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 27 IartmgkgRtlkqcksrwq 45 ar+++ gR + +k++w+ kfl00150_0040 233 LARHLP-GRGQNTIKNHWN 250 **.*********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	15.819	81	135	IPR017930	Myb domain
SMART	SM00717	4.3E-9	85	133	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	2.2E-16	88	148	IPR009057	Homeodomain-like
CDD	cd00167	3.18E-8	88	129	No hit	No description
SuperFamily	SSF46689	3.74E-16	88	135	IPR009057	Homeodomain-like
Pfam	PF13921	2.1E-11	89	146	No hit	No description
PROSITE profile	PS50090	6.295	132	253	IPR017877	Myb-like domain
SMART	SM00717	0.16	136	255	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.0E-10	149	158	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.74E-16	225	253	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.0E-10	229	251	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1158 aa Download sequence Send to blast
MESSVPIVES APEDAIENPI CIIGFEEPSP ELAGGKGFTA PGNQGEGWKQ KPHNGHKFRD 60 KAARESGTLD PGSGSDGGKA GEMRPLPKWS KKEDVVLLNF VKENGKAGWA RVGRMLGRTG 120 KQCRNRFYNA LDPELSAKEW TAEEDRCMVE LHKRFGCRLV FSQRNPEGLQ LHDLRLQKDV 180 TGLFFTLPSS FSFVSPRRPG PQECCKVILV LIFQMSSYKV LSNSSFFSRW AILARHLPGR 240 GQNTIKNHWN CVARTCKDTS TSAKKFAPSP LRAYIASLKP SLENRGESDK GVISSQPGAP 300 SDMEESDKPL PLTALPGGPE IAIAQAGEDP GETGDPPRLR MPIVSDGKPP VALTLDNVIE 360 EGPTAKLARK LGAENDGPVI PLKKQRSESP ERGRGETPLG GASKRSHSAG TVWRLDQISQ 420 WITEWAKPGD VPRGGSPVPV QERGGFQDPQ VGTPRMRATS SGSPQAGSLD STRKRDRGVI 480 DFGENESGER PAESGGHFDW KAQLLAQWTS SRSGGSPEQT AFHLTETGGS TPVTIPLQKQ 540 GRGSAFVATG GAAKRKTRQG GEGHSPRAGG LVVSDLPLDE IDASGGSSGS GNSAEENFDW 600 KAQWAILNAR HPGPGGGAEQ QLPRGGVRWE DMVSGVPPGL LARYASADVS EPGWLRAAIG 660 KSASEASSGG AGRDESEAPL SEGLVAQGVA NTQFSPPLDG SFTALLKEVS DTIRRPPAGA 720 TRVQAHKPQA SGEGGELLRS FGSPPTSAGF GGTDSHLFGG DNSFFRWTVG SPLSEKQFLR 780 SASENESRGE PSAFVLQSSP PDETPLDPEQ TPHPCEELLP ARQSLESGSA GRGPGGLYLG 840 HEPPPQEPRA SWGAGAESGQ HSPPRKASVA NPALTKLVTE HLCSLLDQQA KQFNAVDPAN 900 PTRLDPDQVV KLREQHVQMR AAIAFLSTLT RSGTPVLPYE EGDNREGFGA SVADGSVSLV 960 SPSTPDSASS PIRTPYTEGG GKRPRRGGLL GGAMGGHSGK PVDVGPMQGL RLEEPGVGGG 1020 GEQATEGGGW NELPDDMGDS GDRLEETNAS GAGLKQGDRM PGWVGLEDPK APERIEPVGN 1080 GAEWHQWLAQ QVPPGQVPLP GDSAGGPDAT TAGADVAVRE AKEQSSHSAG HRSPSGASSD 1140 VEQRFAQCFL TWPDENQT

Sequence ? help Back to Top

Protein Sequence Length: 1158 aa Download sequence Send to blast

MESSVPIVES APEDAIENPI CIIGFEEPSP ELAGGKGFTA PGNQGEGWKQ KPHNGHKFRD  60
KAARESGTLD PGSGSDGGKA GEMRPLPKWS KKEDVVLLNF VKENGKAGWA RVGRMLGRTG  120
KQCRNRFYNA LDPELSAKEW TAEEDRCMVE LHKRFGCRLV FSQRNPEGLQ LHDLRLQKDV  180
TGLFFTLPSS FSFVSPRRPG PQECCKVILV LIFQMSSYKV LSNSSFFSRW AILARHLPGR  240
GQNTIKNHWN CVARTCKDTS TSAKKFAPSP LRAYIASLKP SLENRGESDK GVISSQPGAP  300
SDMEESDKPL PLTALPGGPE IAIAQAGEDP GETGDPPRLR MPIVSDGKPP VALTLDNVIE  360
EGPTAKLARK LGAENDGPVI PLKKQRSESP ERGRGETPLG GASKRSHSAG TVWRLDQISQ  420
WITEWAKPGD VPRGGSPVPV QERGGFQDPQ VGTPRMRATS SGSPQAGSLD STRKRDRGVI  480
DFGENESGER PAESGGHFDW KAQLLAQWTS SRSGGSPEQT AFHLTETGGS TPVTIPLQKQ  540
GRGSAFVATG GAAKRKTRQG GEGHSPRAGG LVVSDLPLDE IDASGGSSGS GNSAEENFDW  600
KAQWAILNAR HPGPGGGAEQ QLPRGGVRWE DMVSGVPPGL LARYASADVS EPGWLRAAIG  660
KSASEASSGG AGRDESEAPL SEGLVAQGVA NTQFSPPLDG SFTALLKEVS DTIRRPPAGA  720
TRVQAHKPQA SGEGGELLRS FGSPPTSAGF GGTDSHLFGG DNSFFRWTVG SPLSEKQFLR  780
SASENESRGE PSAFVLQSSP PDETPLDPEQ TPHPCEELLP ARQSLESGSA GRGPGGLYLG  840
HEPPPQEPRA SWGAGAESGQ HSPPRKASVA NPALTKLVTE HLCSLLDQQA KQFNAVDPAN  900
PTRLDPDQVV KLREQHVQMR AAIAFLSTLT RSGTPVLPYE EGDNREGFGA SVADGSVSLV  960
SPSTPDSASS PIRTPYTEGG GKRPRRGGLL GGAMGGHSGK PVDVGPMQGL RLEEPGVGGG  1020
GEQATEGGGW NELPDDMGDS GDRLEETNAS GAGLKQGDRM PGWVGLEDPK APERIEPVGN  1080
GAEWHQWLAQ QVPPGQVPLP GDSAGGPDAT TAGADVAVRE AKEQSSHSAG HRSPSGASSD  1140
VEQRFAQCFL TWPDENQT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1a5j_A	5e-13	89	158	10	80	B-MYB

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HXT6	0.0	A0A1Y1HXT6_KLENI; Myb proto-oncogene protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-13	myb domain protein 98