PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00133_0040 | ||||||||
Common Name | KFL_001330040 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | ARR-B | ||||||||
Protein Properties | Length: 669aa MW: 71549 Da PI: 6.4561 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.8 | 1.2e-28 | 197 | 250 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ eLH++Fv+av+qL G +kA+Pk+il++m+v gLt+e+v+SHLQkYRl kfl00133_0040 197 KQRVVWSVELHQKFVHAVNQL-GVDKAVPKRILDIMQVTGLTRENVASHLQKYRL 250 79*******************.********************************8 PP | |||||||
2 | Response_reg | 90.4 | 4.5e-30 | 17 | 125 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 vl+vdD+pl +++l+++l++ +y v++++ +++al++l+ek+ +Dl++ D+ mp+mdG++ll+ i e +lp+i+++a+ge + + + + Ga kfl00133_0040 17 VLVVDDDPLCLMILERMLRRCQY-TVTTCQRATAALNMLREKKdfYDLVISDVYMPDMDGFKLLELIGLEM-DLPVIMMSANGETDVVMKGITHGA 110 89*********************.***************99999***********************6644.8*********************** PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 d+l Kp+ +eel++ kfl00133_0040 111 CDYLLKPVRIEELRN 125 *************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 1.57E-37 | 14 | 135 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 1.1E-43 | 14 | 153 | No hit | No description |
SMART | SM00448 | 3.2E-34 | 15 | 127 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 45.909 | 16 | 131 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 2.4E-26 | 17 | 126 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 3.69E-30 | 18 | 131 | No hit | No description |
PROSITE profile | PS51294 | 12.575 | 194 | 253 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.51E-19 | 195 | 254 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.7E-29 | 196 | 255 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-24 | 197 | 250 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.9E-8 | 199 | 249 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0010082 | Biological Process | regulation of root meristem growth | ||||
GO:0010119 | Biological Process | regulation of stomatal movement | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0071368 | Biological Process | cellular response to cytokinin stimulus | ||||
GO:0080113 | Biological Process | regulation of seed growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 669 aa Download sequence Send to blast |
MASESAKSDQ FPVGMKVLVV DDDPLCLMIL ERMLRRCQYT VTTCQRATAA LNMLREKKDF 60 YDLVISDVYM PDMDGFKLLE LIGLEMDLPV IMMSANGETD VVMKGITHGA CDYLLKPVRI 120 EELRNIWQHV IRRKRSDLLP KDQEHSGSVD NSKKRDEEAD ISSAPETAQN RKKRKEVDSG 180 GGSDRQDDDV DMASLKKQRV VWSVELHQKF VHAVNQLGVD KAVPKRILDI MQVTGLTREN 240 VASHLQKYRL YLKRLSGVQA EEAQHTKKEP SNFSTAAASF PASLGALASS GLLNPLQQQQ 300 LVNRGALSNL AAFSGRGSLA GTLGNLDQQT LLSLANLQSL QQPGDAQSDR LGALTESLVG 360 GMGREGGGHV AGGAQQLANL QQRERQLHAL NGGGGAGQQQ LASIQQRIQM AQRQNLPSLG 420 GGGGSGGLQG GLGGQGGAAS QNALLLQLLQ QQQQNQNRGL QSLQRGGSGG MGRPGPRMGG 480 LETQQAGLTG RRNSGELSML LNGPGAYAGG DAGAANLLRL HGSGSEDVKG FELGGGGGNY 540 PGLGGYGDGN DGARWGNPGK VGMDPFRGGH WQEGAVRRGK DDGLKSDEYQ SLSLGPMGPG 600 NETSAASDQA RNDREAGPRQ DMPSQDGNQS QDDYLAAFFM KEQGLPEGDL NSEGFQVDDR 660 WKPSDSFVK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 7e-21 | 196 | 256 | 4 | 64 | ARR10-B |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 174 | KKRDEEADISSAPETAQNRKKRK |
2 | 170 | 175 | RKKRKE |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00054 | PBM | Transfer from AT4G16110 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008223286.1 | 1e-110 | PREDICTED: two-component response regulator ARR2 isoform X1 | ||||
Refseq | XP_008223287.1 | 1e-110 | PREDICTED: two-component response regulator ARR2 isoform X2 | ||||
Refseq | XP_009369971.1 | 1e-110 | PREDICTED: two-component response regulator ARR1-like isoform X2 | ||||
TrEMBL | A0A0U9HJP7 | 0.0 | A0A0U9HJP7_KLENI; Putative B-type response regulator | ||||
STRING | XP_008223286.1 | 1e-110 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP292 | 17 | 120 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-98 | response regulator 2 |
Publications ? help Back to Top | |||
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