PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00133_0040
Common NameKFL_001330040
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family ARR-B
Protein Properties Length: 669aa    MW: 71549 Da    PI: 6.4561
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00133_0040genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.81.2e-28197250155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+r++W+ eLH++Fv+av+qL G +kA+Pk+il++m+v gLt+e+v+SHLQkYRl
  kfl00133_0040 197 KQRVVWSVELHQKFVHAVNQL-GVDKAVPKRILDIMQVTGLTRENVASHLQKYRL 250
                    79*******************.********************************8 PP

2Response_reg90.44.5e-30171251109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    vl+vdD+pl +++l+++l++ +y  v++++ +++al++l+ek+  +Dl++ D+ mp+mdG++ll+ i  e  +lp+i+++a+ge + + + +  Ga
  kfl00133_0040  17 VLVVDDDPLCLMILERMLRRCQY-TVTTCQRATAALNMLREKKdfYDLVISDVYMPDMDGFKLLELIGLEM-DLPVIMMSANGETDVVMKGITHGA 110
                    89*********************.***************99999***********************6644.8*********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+l Kp+ +eel++
  kfl00133_0040 111 CDYLLKPVRIEELRN 125
                    *************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.57E-3714135IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.1E-4314153No hitNo description
SMARTSM004483.2E-3415127IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011045.90916131IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.4E-2617126IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.69E-3018131No hitNo description
PROSITE profilePS5129412.575194253IPR017930Myb domain
SuperFamilySSF466892.51E-19195254IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-29196255IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-24197250IPR006447Myb domain, plants
PfamPF002497.9E-8199249IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0010082Biological Processregulation of root meristem growth
GO:0010119Biological Processregulation of stomatal movement
GO:0010150Biological Processleaf senescence
GO:0071368Biological Processcellular response to cytokinin stimulus
GO:0080113Biological Processregulation of seed growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    Send to blast
MASESAKSDQ FPVGMKVLVV DDDPLCLMIL ERMLRRCQYT VTTCQRATAA LNMLREKKDF  60
YDLVISDVYM PDMDGFKLLE LIGLEMDLPV IMMSANGETD VVMKGITHGA CDYLLKPVRI  120
EELRNIWQHV IRRKRSDLLP KDQEHSGSVD NSKKRDEEAD ISSAPETAQN RKKRKEVDSG  180
GGSDRQDDDV DMASLKKQRV VWSVELHQKF VHAVNQLGVD KAVPKRILDI MQVTGLTREN  240
VASHLQKYRL YLKRLSGVQA EEAQHTKKEP SNFSTAAASF PASLGALASS GLLNPLQQQQ  300
LVNRGALSNL AAFSGRGSLA GTLGNLDQQT LLSLANLQSL QQPGDAQSDR LGALTESLVG  360
GMGREGGGHV AGGAQQLANL QQRERQLHAL NGGGGAGQQQ LASIQQRIQM AQRQNLPSLG  420
GGGGSGGLQG GLGGQGGAAS QNALLLQLLQ QQQQNQNRGL QSLQRGGSGG MGRPGPRMGG  480
LETQQAGLTG RRNSGELSML LNGPGAYAGG DAGAANLLRL HGSGSEDVKG FELGGGGGNY  540
PGLGGYGDGN DGARWGNPGK VGMDPFRGGH WQEGAVRRGK DDGLKSDEYQ SLSLGPMGPG  600
NETSAASDQA RNDREAGPRQ DMPSQDGNQS QDDYLAAFFM KEQGLPEGDL NSEGFQVDDR  660
WKPSDSFVK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A7e-21196256464ARR10-B
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152174KKRDEEADISSAPETAQNRKKRK
2170175RKKRKE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00054PBMTransfer from AT4G16110Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008223286.11e-110PREDICTED: two-component response regulator ARR2 isoform X1
RefseqXP_008223287.11e-110PREDICTED: two-component response regulator ARR2 isoform X2
RefseqXP_009369971.11e-110PREDICTED: two-component response regulator ARR1-like isoform X2
TrEMBLA0A0U9HJP70.0A0A0U9HJP7_KLENI; Putative B-type response regulator
STRINGXP_008223286.11e-110(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP29217120
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-98response regulator 2
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]