PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | kfl00128_0150 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 344aa MW: 37233.1 Da PI: 10.9514 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.5 | 1.1e-11 | 254 | 295 | 4 | 44 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 W++eEd+ l++av+++G g+W+ I r Rt+ q+ rw kfl00128_0150 254 WSEEEDKTLLEAVQKHGEGHWEEILRQYFgSDRTAAQLMQRW 295 *************************9887799********** PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-15 | 246 | 297 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 17.107 | 246 | 303 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.42E-15 | 248 | 309 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 3.2E-10 | 250 | 301 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.6E-10 | 254 | 295 | IPR001005 | SANT/Myb domain |
CDD | cd11660 | 6.99E-15 | 254 | 300 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 344 aa Download sequence Send to blast |
MPGPRGMLRS PSTQGLPFLP VAPASPKTDF KHRALAQREA ESLLKRYPGN TVLTILREVA 60 KQGSSKINWV AIHQRIGAAI KGPREAQAIW RCLAYGHAIP ENLAPGVEPL DDDSDIDETD 120 VTKPSTPGIS LAMQMDATAW VKNDLRRIGL EVAATGALRR RLTLPSPAAR PSNSAPLGTG 180 MRPGGVSPVG SSLLGQKRPS HILTQTSSGS RPGSPGFSGT TRLSPLSSQY SPHVSPHVPQ 240 NPSPLGPNKR RHLWSEEEDK TLLEAVQKHG EGHWEEILRQ YFGSDRTAAQ LMQRWALIRK 300 RPATHPPEAE TPTAADNSGR EAGRITRSTD SRLRHGGAWG QSRG |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1HW88 | 0.0 | A0A1Y1HW88_KLENI; DNA-binding protein |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5923 | 15 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G58220.1 | 4e-15 | MYB_related family protein |