PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00124_0310
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family NF-X1
Protein Properties Length: 1207aa    MW: 128595 Da    PI: 8.2995
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00124_0310genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X117.21.1e-05397414118
       zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                    CG+HkC+k+CH G+C pC
  kfl00124_0310 397 CGRHKCEKKCHGGECEPC 414
                    ****************** PP
2zf-NF-X119.22.7e-06610627118
       zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                    CG+H+C++lCH G CppC
  kfl00124_0310 610 CGHHTCGELCHAGYCPPC 627
                    ****************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578507.89E-6225263No hitNo description
PROSITE profilePS500898.993229289IPR001841Zinc finger, RING-type
PROSITE patternPS013590229288IPR019786Zinc finger, PHD-type, conserved site
CDDcd060081.35E-6322378No hitNo description
SMARTSM004380.26340358IPR000967Zinc finger, NF-X1-type
CDDcd060087.86E-12387435No hitNo description
PfamPF014223.6E-4397414IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0025397416IPR000967Zinc finger, NF-X1-type
CDDcd060082.81E-8448491No hitNo description
PfamPF014220.0021458475IPR000967Zinc finger, NF-X1-type
SMARTSM004380.088458477IPR000967Zinc finger, NF-X1-type
CDDcd060081.10E-9510557No hitNo description
PfamPF014220.046520537IPR000967Zinc finger, NF-X1-type
SMARTSM004380.012520539IPR000967Zinc finger, NF-X1-type
CDDcd060085.85E-5568621No hitNo description
PfamPF014220.11578590IPR000967Zinc finger, NF-X1-type
SMARTSM0043812578602IPR000967Zinc finger, NF-X1-type
CDDcd060082.18E-8600643No hitNo description
PfamPF014226.4E-4610627IPR000967Zinc finger, NF-X1-type
SMARTSM004380.12610629IPR000967Zinc finger, NF-X1-type
SMARTSM004380.83667686IPR000967Zinc finger, NF-X1-type
PfamPF014220.024721735IPR000967Zinc finger, NF-X1-type
SMARTSM004384.5721763IPR000967Zinc finger, NF-X1-type
SMARTSM004380.057768789IPR000967Zinc finger, NF-X1-type
PfamPF0142296769787IPR000967Zinc finger, NF-X1-type
PROSITE profilePS5106112.813889954IPR001374R3H domain
PfamPF014242.8E-11891951IPR001374R3H domain
CDDcd023251.50E-9895951No hitNo description
SuperFamilySSF827087.26E-8912952IPR001374R3H domain
Gene3DG3DSA:3.30.1370.501.7E-8914951IPR001374R3H domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1207 aa     Download sequence    Send to blast
MSSTPEAAEQ SGPFRGRGGR QDVSRGSFAS RPQANRGRGG RGGPSQQGSW RSSGAGRGEE  60
ENRGAERRAE AEGGVLGRQP QHYAHGRGGG RQSGFQGLKD GNGHPGAYGG ETSSRNTNRG  120
RNPSSLDRRE PSDTHNQHRK DPVDAPTRTD GPQAPRTPNR EERPPHFSGR GRGHTRGGGR  180
QSDRGGRSGA HAEAATWRPL VGGPVEKWKN VPQLVQELEE KLARGEVECM ICYEQVARAK  240
PVWSCSSCFA IFHLPCIKQW ARAPSSSAGP ELASANQRQA DTWRCPGCQS QQSTSVGNLR  300
YRCFCGARNS PPDDPYLTPH SCGEPCGASL DPKRGGEVHC PHRCTMQCHP GPHPPCTAMA  360
PPQKCYCGKT TQTMRCGDPE RSKGRSCRGV CGKSLACGRH KCEKKCHGGE CEPCGQVVVG  420
KCFCGKKEEA LACGELKQGR LSDGLFSCQG QCGHRLDCGK HDCSKVCHEG PCGGCEYVPE  480
RVSTCPCGKK SLSQLGAGQR TECTDPIPTC GQVCGRPLRC GHFCQDTCHT GECSAKCTAK  540
VRQSCRCGGE SRTVPCHVAN GSGGVFVCTR PCGRKKSCGR HRCSEVCCPG AVGHSEAHLC  600
TLTCGKKLQC GHHTCGELCH AGYCPPCVNS GWEELRCACG KTSIPPPVPC GTPPPACPFP  660
CSFEQPCGHE ATHLCHTGSP CPPCQVPVTK DCAGGHVTLR NVPCGSKDLK CTQPCGRLRE  720
CGVHQCARMC HVAPCSEVEG SDGVRTGIWG REKKQSCGQP CNAHRRECAH SCQATCHPGE  780
PCPEVACREP VTIFCSCSRL TAQVPCCSGA PGGQSPTEKA AIVKLSFPLQ PLPGGVSVPL  840
GKRQLACDEE CQRLEKKRVL ASAFGATPPG EGDSAAAAEA LLEMLRREPQ WLAAVESRLQ  900
ALGQGLKGAV RAHVFRNLPP ERREIIHQLA ERWGLASQSV GREPRRVLVV YGVGKGGKQQ  960
APRPLSRQPV VEERSLLFNA ELDLDFGCVL EFRDLARETN LASALLRFAG ECELLWLNDR  1020
NALVIFGDAG RAGTALRYLD HATAYRGAVA PPAVTKPTPR GADGGAKVAR RRGQVENWHD  1080
DAWGEDEGAG GVGKAKAAPG AWKARGEGFK LKQENLWDAL GGEETGAANM RASAAKADDG  1140
WTQVPAKSKK GGAKGGPVSE DSGDSFIGSE RGVSAGAPGA QRPPEMQTPP KVIDKGQDID  1200
DWEQMLD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HVY90.0A0A1Y1HVY9_KLENI; NF-X1-type zinc finger protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP39501420
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1