PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00118_0070

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

HB-other

Protein Properties

Length: 391aa MW: 41847.4 Da PI: 10.1426

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00118_0070	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.6	2.7e-10	355	387	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+ +e++ LA+++gL+ +qV++WF N+R + kfl00118_0070 355 WPYPTDDEKQALARQTGLSMKQVSNWFINQRKR 387 59*****************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	12.843	328	391	IPR001356	Homeobox domain
CDD	cd00086	7.81E-15	330	391	No hit	No description
SuperFamily	SSF46689	1.58E-16	330	390	IPR009057	Homeodomain-like
SMART	SM00389	1.4E-7	330	391	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	7.5E-24	335	390	IPR009057	Homeodomain-like
Pfam	PF05920	4.1E-17	348	387	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009727	Biological Process	detection of ethylene stimulus
GO:0071369	Biological Process	cellular response to ethylene stimulus
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence Send to blast
MEEESISAKP GLQAGSLPPD LPLLVHDIEC NQSYPKLIAA HVACVQMDTS SPRLYQLELD 60 LAAAHGSIGA EGRAERAAPG LQAAAPEVDA FMAECLAQLG RLKAALESHI SAALRSCEVL 120 EQRLVDALGH RARPPATLSP QVSSLRSSPP QPAADRSRAV GRSRKAADLQ GPLLPASLRK 180 VPSSTGPGAR PSASPHPAFP ALLASTRPLG EIDGTSGLTG HPRGDPTGRV PPAAGRDVGF 240 SRSREPASDL GGGGLSTSTA MLVRRCLQRD AQLGRAEWAT ESGPVGASSE GRGARGPEPA 300 VAASMAKELR HKLKKQYSET LAEVHKEILR KRQAGRLPGD QGHLLKDWWR RHESWPYPTD 360 DEKQALARQT GLSMKQVSNW FINQRKRNWK H

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence Send to blast

MEEESISAKP GLQAGSLPPD LPLLVHDIEC NQSYPKLIAA HVACVQMDTS SPRLYQLELD  60
LAAAHGSIGA EGRAERAAPG LQAAAPEVDA FMAECLAQLG RLKAALESHI SAALRSCEVL  120
EQRLVDALGH RARPPATLSP QVSSLRSSPP QPAADRSRAV GRSRKAADLQ GPLLPASLRK  180
VPSSTGPGAR PSASPHPAFP ALLASTRPLG EIDGTSGLTG HPRGDPTGRV PPAAGRDVGF  240
SRSREPASDL GGGGLSTSTA MLVRRCLQRD AQLGRAEWAT ESGPVGASSE GRGARGPEPA  300
VAASMAKELR HKLKKQYSET LAEVHKEILR KRQAGRLPGD QGHLLKDWWR RHESWPYPTD  360
DEKQALARQT GLSMKQVSNW FINQRKRNWK H

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I3D7	0.0	A0A1Y1I3D7_KLENI; Homeobox protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP167	17	148

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32040.1	6e-33	KNOTTED1-like homeobox gene 5