PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00118_0040

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

G2-like

Protein Properties

Length: 584aa MW: 60025.2 Da PI: 5.9515

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00118_0040	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.4	8.7e-25	228	277	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+rl+Wt eLH+rF++av++L G ++A+Pktil+lm+v+g+t+e+v+SHLQ kfl00118_0040 228 KQRLVWTAELHSRFMNAVNHL-GVKNAVPKTILQLMNVEGMTRENVASHLQ 277 79*****************.9************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-23	226	277	IPR009057	Homeodomain-like
SuperFamily	SSF46689	5.73E-15	227	277	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.3E-21	228	277	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence Send to blast
MSEAGTELNL KLLGAEVGEL PGMTAGGQRE SIDNDESKVT LGLGSGEDQD QPGSLTSLEQ 60 ELLTLGAQPQ DAPQMLPSDL AGSLAGSSVE QAIAAEEAVP GEGAQAGQAA GRGSAGGQVP 120 VGMGAPDYSH AGMQPQEYGA GDYNHYGAQV KLEDNSRRGH QEMPADSGAA GEAGVGGKRP 180 LEGAHAGLGL SRQSTEESLG RHMEGGREGE DGGTEGEEQE GRGQGNKKQR LVWTAELHSR 240 FMNAVNHLGV KNAVPKTILQ LMNVEGMTRE NVASHLQASA PAPARPPHHA CLCKYRLYLK 300 RLAGLPPNAR LSPELVQGGS HLYPYVHQPH EVPPPMMMAP PLHQGYPPHG APYYPPPHRT 360 DTGGPPLMGS PAPASGDASA PGPKPGEGRS GEAGAPPYPA PMGSIPPSPP HFGYTPEMYS 420 SFSSMAHGGW HPLPGPGPGQ PQPGQYRTAD PLPGSPAPPG QGAQYSSPGG GHYSGPVGGS 480 MYNAGAGAVA GVGSPAPLQG SAYGYQGAAG GHYGSPGMGS PGGTGSPPSA QRGSAPAMQQ 540 YAAPTWQQDP PGGGFGQQFW MQPAAQDWQQ KRWPDAGQPQ QRKW

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence Send to blast

MSEAGTELNL KLLGAEVGEL PGMTAGGQRE SIDNDESKVT LGLGSGEDQD QPGSLTSLEQ  60
ELLTLGAQPQ DAPQMLPSDL AGSLAGSSVE QAIAAEEAVP GEGAQAGQAA GRGSAGGQVP  120
VGMGAPDYSH AGMQPQEYGA GDYNHYGAQV KLEDNSRRGH QEMPADSGAA GEAGVGGKRP  180
LEGAHAGLGL SRQSTEESLG RHMEGGREGE DGGTEGEEQE GRGQGNKKQR LVWTAELHSR  240
FMNAVNHLGV KNAVPKTILQ LMNVEGMTRE NVASHLQASA PAPARPPHHA CLCKYRLYLK  300
RLAGLPPNAR LSPELVQGGS HLYPYVHQPH EVPPPMMMAP PLHQGYPPHG APYYPPPHRT  360
DTGGPPLMGS PAPASGDASA PGPKPGEGRS GEAGAPPYPA PMGSIPPSPP HFGYTPEMYS  420
SFSSMAHGGW HPLPGPGPGQ PQPGQYRTAD PLPGSPAPPG QGAQYSSPGG GHYSGPVGGS  480
MYNAGAGAVA GVGSPAPLQG SAYGYQGAAG GHYGSPGMGS PGGTGSPPSA QRGSAPAMQQ  540
YAAPTWQQDP PGGGFGQQFW MQPAAQDWQQ KRWPDAGQPQ QRKW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5lxu_A	1e-22	228	300	1	57	Transcription factor LUX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HVI6	0.0	A0A1Y1HVI6_KLENI; Two-component response regulator ARR-B family

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP1157	17	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59570.1	5e-25	G2-like family protein