PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00105_0150
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 319aa    MW: 33931.4 Da    PI: 8.6972
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00105_0150genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.26.8e-06270292223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     Cp+C + F+++ +L rH  t H
  kfl00105_0150 270 ICPKCQRAFPDPVTLIRHVETeH 292
                    5*****************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183107.33E-13950No hitNo description
PROSITE profilePS510397.8091055IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.2E-101151IPR000058Zinc finger, AN1-type
SMARTSM001547.3E-71352IPR000058Zinc finger, AN1-type
PfamPF014282.1E-131350IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.106.9E-991151IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.96E-994153No hitNo description
PROSITE profilePS510397.96499149IPR000058Zinc finger, AN1-type
SMARTSM001540.6102143IPR000058Zinc finger, AN1-type
PfamPF014288.8E-8102141IPR000058Zinc finger, AN1-type
SMARTSM003550.68236259IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280238259IPR007087Zinc finger, C2H2
PROSITE profilePS501578.829269297IPR007087Zinc finger, C2H2
SMARTSM003554.9269292IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280271292IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MGTLLIPDLG EHCSRADCGQ VDFLPFKCDG CSKVFCLEHR LYGAHSCPKA GAGDASVLLC  60
PICAKAVRII PGEDSNVTWD RHASSAGCDP ANYAKAKRKP RCPVVGCREQ LTFSNKVQCK  120
ECQQVVCLRH RFGPEHLCPG KPTAAKTATA YGKKFLQSFN NTFGTSAAAS AASSSKPNSS  180
KSGSNSKPAA NPKRVPPKQA AAIPSSPQNT VQGSAFRRMQ GAGVAERSSN GSTGAEECPV  240
CHFRCDNVNE LIAHSEAVHS QSGQPAGPDI CPKCQRAFPD PVTLIRHVET EHFGNSREQS  300
SSSGLAGFFK RTLDSLKQL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HZ950.0A0A1Y1HZ95_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP19091520
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57480.13e-55C2H2 family protein