PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00096_0150
Common NameKFL_000960150
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family WRKY
Protein Properties Length: 627aa    MW: 68367.7 Da    PI: 9.3083
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00096_0150genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.8e-31311367259
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    +DgynWrKYGqK+vkgs++prsYY+Ct++gC vkkkvers+ d+kv e +Y+g+H+h+
  kfl00096_0150 311 EDGYNWRKYGQKQVKGSQYPRSYYKCTHPGCDVKKKVERSK-DGKVAENVYKGTHTHP 367
                    7****************************************.***************8 PP
2WRKY104.46.1e-33529587159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDg++WrKYGqK+vk++ +prsYY+Ctsa+Cpv+k+versa+d ++v++tYeg+Hnh+
  kfl00096_0150 529 LDDGFRWRKYGQKQVKDNSHPRSYYKCTSANCPVRKHVERSATDIRAVITTYEGKHNHD 587
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.0E-28307369IPR003657WRKY domain
SuperFamilySSF1182901.44E-24309369IPR003657WRKY domain
SMARTSM007743.3E-34310368IPR003657WRKY domain
PfamPF031064.2E-24311367IPR003657WRKY domain
PROSITE profilePS5081124.248311369IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.9E-36514589IPR003657WRKY domain
SuperFamilySSF1182902.22E-28521589IPR003657WRKY domain
PROSITE profilePS5081134.325524589IPR003657WRKY domain
SMARTSM007743.3E-38529588IPR003657WRKY domain
PfamPF031065.6E-25530587IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    Send to blast
MSHNSDKGRE DPPGFGLSLA PPTGNPMTLA VSSPVEFGRM DLGLDVNPSS YTRSLHPFLR  60
PSAAEATAGG VPTEHDEDTH TLTGRKLEAL QDLAADFLKM VKDSSSKELG GDGELKTQSL  120
FRTVPTNMAK PPLGQNPIRR FGSQRQNSLR FRTNPPERMD IPRAVAIPPN MFSPSMLESP  180
ILLRSSQAEP SPTTGTFPLP PFFQGGGPAL SSSPRSREQQ EAASQQGFMF FQNRQARSEQ  240
VPTRLMSPLS GQVAQSPPQQ PIPFFNSSIS PQYKPSPSRP PVASRPPIPM PQPLQISDPP  300
EMLEEFEKPS EDGYNWRKYG QKQVKGSQYP RSYYKCTHPG CDVKKKVERS KDGKVAENVY  360
KGTHTHPMPM PPRRFIQGSP STMVSPQAIK ATQEVPSDNV RSPGGEGAEG LDDSATVEIT  420
TEMEIRSRIE MLKRELSMAG GVPSLHIPDA SNEPPDLNKG ASPLTATPPR SAASSFESGG  480
GTAERKRAAE EGEEVTQAAK KARLIPPPSG RNAREPKVVV QTTSDVDILD DGFRWRKYGQ  540
KQVKDNSHPR SYYKCTSANC PVRKHVERSA TDIRAVITTY EGKHNHDPPV IGSHHHDSRP  600
STPPLPAGTT KSLGIQSVDT HSLEGQG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-32311589877Probable WRKY transcription factor 4
2lex_A2e-32311589877Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HUJ60.0A0A0U9HUJ6_KLENI; WRKY DNA-binding protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.15e-63WRKY family protein
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]