PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00089_0200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | E2F/DP | ||||||||
Protein Properties | Length: 711aa MW: 76705 Da PI: 9.3443 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 44.5 | 2.6e-14 | 96 | 161 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r++++L+ l +++l+l+ ++ +++l a++L v k+RRiYD++NVLe+++++e+k++ + wkg kfl00089_0200 96 RQQRTLTSLVERLLELFGNKVGSVLSLGCLAEDL---GV--KKRRIYDVMNVLESIQVVERKAQDLYIWKG 161 67899**************999************...**..9***************************98 PP | |||||||
2 | E2F_TDP | 42.3 | 1.2e-13 | 209 | 282 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflkllekseegivtlnevakeLvse...dvknkrRRiYDilNVLealnliek...kekneirwkg 71 ksL++l+++f++++ + +++ ln++ ++ + v+ +rRR+YD++N+L+ l+l+ k ++ +++ w g kfl00089_0200 209 KSLKVLSEEFVRVFLADQGQVILLNKAVSAVLGGlndGVQSIRRRLYDVANILSCLHLVVKfqaSQGPAYLWLG 282 8***************999*******999987656669999********************7666667777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 3.0E-17 | 93 | 162 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SuperFamily | SSF46785 | 1.3E-11 | 96 | 159 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM01372 | 2.4E-15 | 96 | 161 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
Pfam | PF02319 | 7.9E-13 | 98 | 161 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
Gene3D | G3DSA:1.10.10.10 | 2.7E-12 | 202 | 283 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM01372 | 2.9E-8 | 206 | 282 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
SuperFamily | SSF46785 | 3.81E-6 | 209 | 283 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF02319 | 3.5E-10 | 209 | 282 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005667 | Cellular Component | transcription factor complex | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 711 aa Download sequence Send to blast |
MGYSALFEQD LPVKIEMRSG SEAAPAINQP GEPRPPLQEI VTNVVTSANR LGSKPKLKER 60 LGQCKEKAAI DAVQKDPPAS EVEEQLDLSG DAEDPRQQRT LTSLVERLLE LFGNKVGSVL 120 SLGCLAEDLG VKKRRIYDVM NVLESIQVVE RKAQDLYIWK GASSIKDALD ALAFEAEMRT 180 IDADGETPHS SNEEASATEA PRRDTRLFKS LKVLSEEFVR VFLADQGQVI LLNKAVSAVL 240 GGLNDGVQSI RRRLYDVANI LSCLHLVVKF QASQGPAYLW LGIPGLQERL GDRPVRLPSD 300 DFADAFLTRS GFKICEEDSR EKPSHSGRPP LSPVPLPPRQ RPSAPASAFR RPVPLAQSSS 360 SQNLSSGSGK PPRMSGPPSE CAKPPRLSLP PSGSAKPPRL SLPPGASHQP GQPLASPTLT 420 YNPFEPFLPA RLQPTFTLPS RKPPVPVLRP TPRRLSSIPP VPRFPGPAPP GNKSRREPET 480 VRRTGARLSI PGHRRELSEA TRVSTSDFTP YRQPACRDLP GSCSGVPLST ASAAQVASRS 540 SLARPEYDSG RVSAPVAGES KRSSLPSEPT VVAGTSASVS PRPGSVSEGH CGDDHIPCQT 600 ARADLATSSE REAAPEPGSQ EQGGLATWTD ACRDVRINRP FELLNNVTQV LLLLRNPAAL 660 SDADEYTRAL ADARTRILPH IPAADLRRQL PPHLASVMGF AYQNGRAKAN L |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1HXQ4 | 0.0 | A0A1Y1HXQ4_KLENI; Transcription factor E2F/dimerization partner (TDP)-like protein with Winged helix-turn-helix transcription repressor DNA-binding |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP2474 | 16 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 2e-26 | DP-E2F-like 1 |