PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00088_0250
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HB-other
Protein Properties Length: 473aa    MW: 50302.8 Da    PI: 7.7655
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00088_0250genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.61.3e-1572126356
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    kR ++t+ q++eLe+ F+k    p +e+r+ +A++ g++++q+  WF+NrR++++
  kfl00088_0250  72 KRKRLTEAQVQELERIFQKePTGPPTETRAAIAREFGVPQNQIASWFHNRRTRQR 126
                    8999**************94556******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.64E-1466128IPR009057Homeodomain-like
PROSITE profilePS5007114.91667128IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.7E-1468132IPR009057Homeodomain-like
SMARTSM003898.7E-1169132IPR001356Homeobox domain
PfamPF000462.8E-1372126IPR001356Homeobox domain
CDDcd000861.73E-1372129No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MSGGHGMDID EITEGLTSPE ALEELLTSLQ GVPQPPPRVP SPKTPLVPTS APPEWGGEPG  60
GGIGEDPEGG EKRKRLTEAQ VQELERIFQK EPTGPPTETR AAIAREFGVP QNQIASWFHN  120
RRTRQRARQL KEDFDVMKRR LDLAYLENQQ LRHEVGLVIG LVGFVFGFLN AIRAEHANCP  180
PLPTTSRGSA TGPAATPRSG EIDITPLRIP DAREETRTAK RGGKRASPEP PSGIATLLIP  240
KRERPFSPGA QRAPSPPQLA ALPNFRSDPF RPGVSAPELP TFASQYARSL LTSPPAVPTT  300
PFPEVSQIPA SFPGVNRPAR LPSILAPLPL PASDITARLT PHETPVPRTG FTAPYPGQLD  360
PTNRLFPPAL TGDMTLDEAF REVFTGGPVA VDPLDHPYPP GADAFGYSEG APAAVAAATA  420
SFPMRAPSPS LGNWLWAVGS GSSTAGSSTS GSLMGGFNLG GKARPKNKDR EGQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HSW90.0A0A1Y1HSW9_KLENI; Homeobox-leucine zipper protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.17e-14homeobox 51