PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00064_0080
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family GATA
Protein Properties Length: 342aa    MW: 37453.5 Da    PI: 5.3713
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00064_0080genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA467e-15223258134
           GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                    C+nCg  +  Tp++Rrgp g+ tLCnaCGl +++kg
  kfl00064_0080 223 CTNCGIGEkqTPMMRRGPHGPGTLCNACGLQWASKG 258
                    ****865555***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009796.9E-1293128IPR010399Tify domain
PROSITE profilePS5132015.55893128IPR010399Tify domain
PfamPF062006.5E-1495127IPR010399Tify domain
PROSITE profilePS5101713.503155197IPR010402CCT domain
PfamPF062032.4E-15155197IPR010402CCT domain
SMARTSM004016.8E-16217270IPR000679Zinc finger, GATA-type
PROSITE profilePS501148.669217276IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.76E-11218268No hitNo description
Gene3DG3DSA:3.30.50.102.5E-13221263IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.08E-14222270No hitNo description
PfamPF003205.9E-13223258IPR000679Zinc finger, GATA-type
PROSITE patternPS003440223250IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MAALGEEPAG LAQAEQDAHQ HEQQLEQHHG MHEGAMHEGG IHEGGMHEGG MHEGGMHEGV  60
LHEGTPVHQG HPGHEDVEIE GEEYDDDPMS VRDPSNTKQL TLSYQGEVYV FDTVPPEKVQ  120
AVLLLLGSQE TPAGLSLAQL GKGYDLPSRL NQPMRLASLQ RFREKRKERN YDKKIRYSVR  180
KEVAQRMQRK KGQFASNRPQ PSDDGSGGGE FGSDGQAHQE MTCTNCGIGE KQTPMMRRGP  240
HGPGTLCNAC GLQWASKGAL RDTRKDKQPR DSMDGQENVH QEYLPQLLPE PISSEHQSMV  300
QGQEVLGQQI QAIDVPGNQL AIEGVLPNAT EMAPPIANGT AQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00198DAPTransfer from AT1G51600Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024368631.12e-72GATA transcription factor 24-like isoform X1
RefseqXP_024368632.12e-72GATA transcription factor 24-like isoform X1
RefseqXP_024368633.12e-72GATA transcription factor 24-like isoform X1
RefseqXP_024368634.12e-72GATA transcription factor 24-like isoform X1
RefseqXP_024368635.11e-72GATA transcription factor 24-like isoform X2
SwissprotQ8H1G02e-65GAT28_ARATH; GATA transcription factor 28
TrEMBLA0A1Y1HSQ00.0A0A1Y1HSQ0_KLENI; GATA transcription factor
STRINGPP1S226_47V6.16e-72(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP8311661
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-61ZIM-LIKE 2