PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00063_0300
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 627aa    MW: 68152.3 Da    PI: 8.0284
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00063_0300genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015100121323
                    ETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                    C+dC+ sF ++  L  H  + H
  kfl00063_0300 100 CQDCTVSFVTQQGLLDHRALiH 121
                    *****************98877 PP
2zf-C2H211.50.0009123145223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                    +C dC++ F ++  L++H    H
  kfl00063_0300 123 SCLDCKRAFASQIALQQHRIHvH 145
                    6*****************87666 PP
3zf-C2H217.79.8e-06411434123
                    EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                    ++C+ C+k+F++   L +H+r  H
  kfl00063_0300 411 FVCKECDKTFKSGPALSQHLRDiH 434
                    89******************9777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.683331IPR007087Zinc finger, C2H2
SMARTSM003552.4326IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280526IPR007087Zinc finger, C2H2
PfamPF139124.8E-43048IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.3883053IPR007087Zinc finger, C2H2
SMARTSM003550.0133053IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803253IPR007087Zinc finger, C2H2
SMARTSM003551.898121IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280100121IPR007087Zinc finger, C2H2
PROSITE profilePS501579.203122150IPR007087Zinc finger, C2H2
SMARTSM003551.9122145IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280124145IPR007087Zinc finger, C2H2
SuperFamilySSF576672.03E-7203254No hitNo description
PROSITE profilePS5015710.159207237IPR007087Zinc finger, C2H2
SMARTSM003554.8207232IPR015880Zinc finger, C2H2-like
SMARTSM003550.73236260IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280238260IPR007087Zinc finger, C2H2
SMARTSM003554.5293318IPR015880Zinc finger, C2H2-like
PfamPF139120.0046294313IPR007087Zinc finger, C2H2
PfamPF128740.026350369No hitNo description
PROSITE profilePS501579.806350380IPR007087Zinc finger, C2H2
SMARTSM003556.4350375IPR015880Zinc finger, C2H2-like
SuperFamilySSF576678.73E-8381431No hitNo description
PROSITE profilePS501579.432382407IPR007087Zinc finger, C2H2
SMARTSM003559.1382407IPR015880Zinc finger, C2H2-like
PfamPF139124.9E-5410435IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.608.3E-4411434IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.365411434IPR007087Zinc finger, C2H2
SMARTSM003552.2E-4411434IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280413434IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.40.107.3E-12572620IPR013083Zinc finger, RING/FYVE/PHD-type
SuperFamilySSF578501.88E-12573622No hitNo description
PfamPF139202.1E-14574620No hitNo description
CDDcd001629.00E-6576619No hitNo description
SMARTSM001841.5E-4577615IPR001841Zinc finger, RING-type
PROSITE profilePS5008911.634577616IPR001841Zinc finger, RING-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    Send to blast
MAYYCGPCNQ QFPSQRAYAE HAAALHTLSH KCAQCGRLFR SEQALSEHVT VIHPIQPLSR  60
PLPKPPAAKP AQKQLLQKPD ATQPLSKPLP TPPALEQLAC QDCTVSFVTQ QGLLDHRALI  120
HPSCLDCKRA FASQIALQQH RIHVHSRSSS QAAPAVVLPK PKNQHALQLH SAYLQKVRSS  180
CGNDQQVQQH ALANVSKGSG APGEQGFDCE ECEKRFLSLA ALEQHAKDTK GHKREFQCRV  240
CDLVFLTKAG LGQHCNGDVH RMRVANNGVK GESSSGMVPG KLPNGSLSAP SVVRCDVCNK  300
DFETLQRLAQ HRKDTPGHAQ RVVLQSSVRT LPPNPGFGLR KPSAAQAGGF ACRPCQKEFA  360
SQAALDQHFS NSTVHAEADD RFACGPCGAV FASSAELERH KLALPSHVET FVCKECDKTF  420
KSGPALSQHL RDIHKQRVLV ESHQNPKFVP ASKQPQVYKP TPSDTMKKVS KMIEKRLAEL  480
PVQASIEPFI DEWRPGASKV DVGSQFDGRA FDGGESAPNG HDQNGDLVRG PEEEAGTDAR  540
VQEVELEVQA ASVATAQAAP EGASAVAGGT VRHEDECIIC LDARRDTLYL PCGHFCFCHE  600
CAVHNQEKGN PCPQCRTPID LLLKVLA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HY990.0A0A1Y1HY99_KLENI; Uncharacterized protein