PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00061_0230 | ||||||||
Common Name | KFL_000610230 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 25304.4 Da PI: 8.5024 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.1 | 4.2e-15 | 55 | 103 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h+e+ErrRR+riN + +Lr llP++ +K +Ka+ L ++++++k+Lq kfl00061_0230 55 SKSHSEAERRRRERINAHLGTLRNLLPHP-----TKADKASLLGEVIDHVKELQ 103 689**************************.....9******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.83E-15 | 50 | 109 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.2E-15 | 53 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.571 | 53 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.0E-12 | 55 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.8E-14 | 59 | 108 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.58E-4 | 66 | 105 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 1.9E-6 | 135 | 193 | No hit | No description |
CDD | cd04873 | 2.59E-7 | 139 | 206 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MESSKSGAGD PTLRNGDSGT PPAPALPPRL QAKDNSLSRA DSFQSKDGSS GESKSKSHSE 60 AERRRRERIN AHLGTLRNLL PHPTKADKAS LLGEVIDHVK ELQRQADEVA GEGVPSGGDK 120 VLVTLDEQEG AQVLKVAMSC EDRPELLTEV VKAIQRCKLR TLRAEMTTLG GRVRLDLLLG 180 SEEESKEQKL PKDVCKAVRD ALTAVIERNA SLSNPNWPES KRQKTGNGQT VTAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 66 | ERRRRE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0U9HS06 | 1e-167 | A0A0U9HS06_KLENI; Basic helix-loop-helix protein | ||||
STRING | GSMUA_Achr1P21280_001 | 2e-37 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP377 | 15 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 2e-25 | bHLH family protein |
Publications ? help Back to Top | |||
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