PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00049_0250
Common NameKFL_000490250
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 334aa    MW: 38857.6 Da    PI: 8.0871
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00049_0250genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002189112123
                    EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                    y+C+ Cg   ++ + L++H +  H
  kfl00049_0250  89 YRCGVCGAKLKTADKLEKHFKQlH 112
                    9******************98766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10109.3E-101265IPR029060PIN domain-like
PROSITE profilePS5015710.80389117IPR007087Zinc finger, C2H2
PROSITE patternPS00028091112IPR007087Zinc finger, C2H2
CDDcd061679.61E-10122255No hitNo description
PfamPF019364.7E-9165243IPR021139NYN domain, limkain-b1-type
Gene3DG3DSA:3.40.50.10109.3E-10169237IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MEGEAPQILR PQVAIYWDLD NKTPNQDPRV VADRIRAIGE RFGQVKEFRA YANRHTFQHI  60
PSYVREEREL RKQVRLEERQ GVRVSDEPYR CGVCGAKLKT ADKLEKHFKQ LHERERQKKV  120
NRAQSLSKKK PSQSKRLFAK IKEKDARNTY FDVARDIITP KVGYRLMSDL KSRGVRVREV  180
KDQSQAADAA IISDLEYLLT KPNHVESVVL VSDDSDFGRA LARVRASERR VVVVGEKPGL  240
VKSADVLYHW WDVHEGLANR PDYRCPPERF EHRQGPRVGG LEAHELEADD YEEFEEFGEG  300
DEFGGLDEYG NYRDADVDEI LFGRSFEESR SWRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HIL00.0A0A0U9HIL0_KLENI; C2H2 zinc finger protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP30481420
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-45C2H2-like zinc finger protein
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]