PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00030_0250
Common NameKFL_000300250
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family G2-like
Protein Properties Length: 861aa    MW: 90837.9 Da    PI: 5.9812
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00030_0250genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.8e-32316370155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+rlrWtpeLHerF++av++LGG ++AtPk +l++m+v+gLt++h+kSHLQkYRl
  kfl00030_0250 316 KQRLRWTPELHERFIKAVTHLGGGDRATPKGVLRMMGVQGLTIYHIKSHLQKYRL 370
                    79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.998313373IPR017930Myb domain
SuperFamilySSF466894.12E-17314371IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.8E-31315371IPR009057Homeodomain-like
TIGRFAMsTIGR015577.4E-25316371IPR006447Myb domain, plants
PfamPF002493.5E-10318369IPR001005SANT/Myb domain
PfamPF143794.0E-21502548IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 861 aa     Download sequence    Send to blast
MDLIGRSKSR GGGGGEEPAQ GFANLLHFGT NPATTGGQLQ VEFPGLSGPL SNPVLAPTAL  60
IEQAEATDTQ GGRLAKGGSS GSDDAANQRL PPGGRKARVG LPRQHDKAGP ELSPDLRGLQ  120
NLPGLQNLPG LGPPNQYGDF SLGGMTSAVA ALLRGSPDFM VEGGLGQGLA GGGTGGTVTP  180
NWPVWGENPE EDGIGPVWSE LLVPPPAGEG ENADGTGGSH QRQGGTVASL LGGGRELNLG  240
SLSRFQLENK PSQSSASLPA HLLIPQRQFR HAPGAHLVQS LPPTSSPLKP PGKEEDSSGG  300
HQSQGVRHSQ LAPMPKQRLR WTPELHERFI KAVTHLGGGD RATPKGVLRM MGVQGLTIYH  360
IKSHLQKYRL NKYDGPESSH SSQPGPQHEA GTPDSHPPTA EESFKGPPSQ DSPRVKPPSK  420
LVDSASTENP PPGKRPSKGK RKVKEGGELQ RQNSGKSSEL RRPLLTRKGS LDRPQKNMDV  480
MQTSSLNLAH QASALKQVQD AQMSDALQMQ MEVQKKLHEQ LEIQRQLQLR IEAQSKYLQC  540
ILEAQQKASL MLQQQQAAGG DFSGAREGQP LPPISAAGAF SLALEGRASA SLKPFSLPDM  600
DLQAPMLGEG GQGFADVSSS ERGFVPYEVG GAELPPRKRR SKELEATHLP LEEPLPLQPF  660
SEAVARILEH GPQGAELRQW SERVAAQSTG TTSSLSRTGL ETEGLANLEP IANAWEVGGN  720
GLGDSGAAAA LDLADEHAKE FGKVEGDPWP APFAQNDVDP ASQLDRQNAR GFQTGGLSGG  780
EAGTRGGGRG NHVAPNSYSS MMPSELIELN VPPQESEVAW TPENSIIEDG LGGLESDPTF  840
GHRDNEKDGP DDGGDTQRPT T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-23316373158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-23316373158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-23316373158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-23316373158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HIH70.0A0A0U9HIH7_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-28G2-like family protein
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]