PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00029_0340
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 793aa    MW: 86399.3 Da    PI: 6.2082
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00029_0340genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00037175197123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++Cg++Fs +  L  H++ +
  kfl00029_0340 175 FPCEHCGRVFSEQVRLYGHLSQC 197
                    89**************9999765 PP
2zf-C2H212.60.00043266285120
                    EEETTTTEEESSHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                    ++Cp Cg+sF +   L  H 
  kfl00029_0340 266 FTCPECGRSFASAQALGGHK 285
                    89*********999887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.21E-5105129No hitNo description
SMARTSM00355240107127IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.21E-5171194No hitNo description
SMARTSM0035540175195IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.489175208IPR007087Zinc finger, C2H2
SMARTSM003550.023266288IPR015880Zinc finger, C2H2-like
PfamPF139128.9E-9266290IPR007087Zinc finger, C2H2
PROSITE profilePS5015712.133266293IPR007087Zinc finger, C2H2
SuperFamilySSF576673.63E-6266329No hitNo description
PROSITE patternPS000280268288IPR007087Zinc finger, C2H2
SMARTSM003550.68307329IPR015880Zinc finger, C2H2-like
PfamPF139121.8E-6307330IPR007087Zinc finger, C2H2
PROSITE profilePS501579.058307329IPR007087Zinc finger, C2H2
PROSITE patternPS000280309329IPR007087Zinc finger, C2H2
SMARTSM003556.3370392IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280372392IPR007087Zinc finger, C2H2
PfamPF139124.3E-8372394IPR007087Zinc finger, C2H2
Gene3DG3DSA:1.20.920.102.4E-31404551IPR001487Bromodomain
SuperFamilySSF473701.96E-27406521IPR001487Bromodomain
SMARTSM002978.2E-24416526IPR001487Bromodomain
PfamPF004392.8E-15431509IPR001487Bromodomain
PROSITE profilePS5001417.508435507IPR001487Bromodomain
PRINTSPR005034.5E-14438451IPR001487Bromodomain
PROSITE patternPS006330440499IPR018359Bromodomain, conserved site
PRINTSPR005034.5E-14454470IPR001487Bromodomain
PRINTSPR005034.5E-14470488IPR001487Bromodomain
PRINTSPR005034.5E-14488507IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 793 aa     Download sequence    Send to blast
MASHRSRSRQ RAEQGHAMEE EDGDTSGMES NEDEDDLFQD ALDGEEIDRD QQEKEDALLQ  60
LSDPRSYSTR PRRVPPPEPA PQNDHPQPRV RKRKAADLDQ DAIDKPHACE HCGKRFAVLA  120
ALWGHTPRCA TRTQNLNLEP HPFDRPKFAT AQKAPPTPPP TRVSGRPKKP TGEEFPCEHC  180
GRVFSEQVRL YGHLSQCAKR LAHAGKKSAG PETPRGSKKQ AVPEAAEEEE DDGESTPPGS  240
PQGSEGPILI RLKRSGKSSE QEDGEFTCPE CGRSFASAQA LGGHKGSHRS SREEPTPTPA  300
KVVEMGFQCQ ICGAIFSNGQ ALGGHKGSHK PTDVYTEEDK RQNARRSSSG VASPPVRRRP  360
AENNATDGGW ACDVCGLVFA TGQALGGHKG SHKASDYYSE DEKQSNKRRT APAAKPEDSP  420
EAQLKKALGA LKKTMQIADA EPFNVPVDAE GLGIPDYLEV VKSPMDFGTI RTKLEKGEYP  480
GVAEMLTDVR QVSENCRLYN NEADPIVEML EVVERRFKSE WVKAGLPLDD EGRPATPPPP  540
DSGEEEEGSE SEAEGSSPHR ERRVRFAPGI QSPPLRTRPP ETSTDHSEPE EQAQGTEPRR  600
GRGRPPGRVR ARQPLKTGTA LHRPNCPCVI CKQGRKSGRG RFDRDGSDGE SDGGPRPRRS  660
EALHSSDEEE SEAAEDAPRQ YYEKGAHLPP AQLSAATWRL GHQLFANSAG ARLERARGAS  720
YLADLLQILH RPDESTSADV NAASDDAWDG GKSENSRDEL GPLLSGARRM GPEDLRGALA  780
GLLVPRGTVA GVR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1x0j_A1e-1544053824120Bromodomain-containing protein 2
1x0j_B1e-1544053824120Bromodomain-containing protein 2
1x0j_C1e-1544053824120Bromodomain-containing protein 2
2dvq_A1e-1544053824120Bromodomain-containing protein 2
2dvq_B1e-1544053824120Bromodomain-containing protein 2
2dvq_C1e-1544053824120Bromodomain-containing protein 2
2dvr_A1e-1544053824120bromodomain-containing protein 2
2dvr_B1e-1544053824120bromodomain-containing protein 2
2dvr_C1e-1544053824120bromodomain-containing protein 2
2dvs_A1e-1544053824120bromodomain-containing protein 2
2dvs_B1e-1544053824120bromodomain-containing protein 2
2dvs_C1e-1544053824120bromodomain-containing protein 2
5hel_A1e-1544053828124Bromodomain-containing protein 2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HL970.0A0A1Y1HL97_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.11e-12C2H2 family protein