PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00028_0450

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

C2H2

Protein Properties

Length: 930aa MW: 97279.9 Da PI: 5.029

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00028_0450	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8e-05	637	659	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg++F + L H+r+H kfl00028_0450 637 YQCKLCGEVFAYSQALGGHMRSH 659 9*********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	2.47E-6	633	661	No hit	No description
Gene3D	G3DSA:3.30.160.60	1.7E-5	636	659	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
Pfam	PF13912	2.3E-8	637	660	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	11.115	637	659	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.0035	637	659	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	639	659	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 930 aa Download sequence Send to blast
MKPQAGSGQT AAAVHGDHGV PQCDRGSQDL QEDDVKESLE SEAEKAAGRR KSPDSELGKD 60 QAPSSPTGSN TEESGPRGPS TEQAAEGQPS RQGHVESLQT PEGVVRAHAA YTEQHLANQV 120 QGLHLGAPRS AGQARPSAPP PHPESLGFTL HQAASQGPLA PAPQDQPPPQ TAALFPPARA 180 PSQVPDAVVN HPGWQIACQL LQSTPPGSWP DPALLVLLAA AEPGGAAAHL LRALPPQGGA 240 RRPGAPGAGR KSRAHPEWSN ERLRCPQGAQ QGEPELPSVV LVPQAGIARL VEERVEVAPS 300 GGLQTRRLRP FFGIDLEKLP EAEDNVDKMR IAPRGEAEDA AGGGRAENAA DSDYTRQGRS 360 DEKEERALGK PLEVTASAEA PSGKEGAGER GRENREGVSP SSEQEADPEG GGEEAVEGGG 420 HEDGQSIPGS GGAPDPTEGP RQAQEDIDEV FEGRRKESGG EADEHAPKEG ATAESPSAPR 480 SRGESQEEAV EKEKGDRWEN SDAAGQQGGA ERVGDKKGDR LRGGTRAEGP VMGAGPMEWK 540 HERLGNKHWQ EPGRFGGRER VSSEDPPKRK ARDFGFAHQD VYKIRRRALQ EGGLMASARS 600 DLSLLDHLIG ASEQSVDRAP QGQDPQDGPG QAGRGPYQCK LCGEVFAYSQ ALGGHMRSHK 660 YNGALPPQPS LDQFQLPRPP PSQFHSFPSG ARSSGGFQIQ ADAMAAALQA LDAPTLSLGS 720 ALGYMNPPHN HDVALGLAQA GDPSTALGRP ERERPPGLVN QTEIRPTARN FQHGSPITGP 780 GNSPVRPSGA DALLPSRVPS PASPIIYLPG QGAAPGGWFE LEPVDIEHPE RIPPVSIGGS 840 PKLVAEQILE ALVGYAERPT TAAVQPALPD AGAAALFSLY EPLSAVEQTG ILDQLRGQQV 900 DESRAGGGLA NLATTGAQGW APGYGSRGPA

Sequence ? help Back to Top

Protein Sequence Length: 930 aa Download sequence Send to blast

MKPQAGSGQT AAAVHGDHGV PQCDRGSQDL QEDDVKESLE SEAEKAAGRR KSPDSELGKD  60
QAPSSPTGSN TEESGPRGPS TEQAAEGQPS RQGHVESLQT PEGVVRAHAA YTEQHLANQV  120
QGLHLGAPRS AGQARPSAPP PHPESLGFTL HQAASQGPLA PAPQDQPPPQ TAALFPPARA  180
PSQVPDAVVN HPGWQIACQL LQSTPPGSWP DPALLVLLAA AEPGGAAAHL LRALPPQGGA  240
RRPGAPGAGR KSRAHPEWSN ERLRCPQGAQ QGEPELPSVV LVPQAGIARL VEERVEVAPS  300
GGLQTRRLRP FFGIDLEKLP EAEDNVDKMR IAPRGEAEDA AGGGRAENAA DSDYTRQGRS  360
DEKEERALGK PLEVTASAEA PSGKEGAGER GRENREGVSP SSEQEADPEG GGEEAVEGGG  420
HEDGQSIPGS GGAPDPTEGP RQAQEDIDEV FEGRRKESGG EADEHAPKEG ATAESPSAPR  480
SRGESQEEAV EKEKGDRWEN SDAAGQQGGA ERVGDKKGDR LRGGTRAEGP VMGAGPMEWK  540
HERLGNKHWQ EPGRFGGRER VSSEDPPKRK ARDFGFAHQD VYKIRRRALQ EGGLMASARS  600
DLSLLDHLIG ASEQSVDRAP QGQDPQDGPG QAGRGPYQCK LCGEVFAYSQ ALGGHMRSHK  660
YNGALPPQPS LDQFQLPRPP PSQFHSFPSG ARSSGGFQIQ ADAMAAALQA LDAPTLSLGS  720
ALGYMNPPHN HDVALGLAQA GDPSTALGRP ERERPPGLVN QTEIRPTARN FQHGSPITGP  780
GNSPVRPSGA DALLPSRVPS PASPIIYLPG QGAAPGGWFE LEPVDIEHPE RIPPVSIGGS  840
PKLVAEQILE ALVGYAERPT TAAVQPALPD AGAAALFSLY EPLSAVEQTG ILDQLRGQQV  900
DESRAGGGLA NLATTGAQGW APGYGSRGPA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HL51	0.0	A0A1Y1HL51_KLENI; Uncharacterized protein