PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00028_0390 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | C2H2 | ||||||||
Protein Properties | Length: 1153aa MW: 128690 Da PI: 6.3139 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.6 | 4.6e-05 | 266 | 289 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 +kCp C+k F + ++L H+ + H kfl00028_0390 266 HKCPTCDKLFESAYYLDLHMARrH 289 79******************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13815 | 1.3E-20 | 129 | 236 | IPR032714 | Zinc finger protein DZIP1, N-terminal |
PROSITE profile | PS50157 | 8.663 | 266 | 294 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.0075 | 266 | 289 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 268 | 289 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1153 aa Download sequence Send to blast |
MGRSTGGVTG QWDGEVRPLA SQRRSRGTTK WGTRNPKSMG QVDFLNGTSK SFGRQKSGVE 60 FGNNMTKILG QEEDGWVSSS SPSDDELAYG TRPRNTIPRA TSMPAQPGTM DFDMESRLMA 120 TVAGTTAPFM FEKRRTRIDW RKLHGIDVDR VIREADIDTL ESILDTIAFG DIEAEDTRNF 180 TEFNFVEYLL HVQETLASHK SQLVVAGATV QRKTQKLHST VSWHRDALAA TRRDLKQAKK 240 TLSTYEILLR LHGHGQGPAP SSQQTHKCPT CDKLFESAYY LDLHMARRHP RPPEEDPKAI 300 LAAAVAKAEE MTTIKVRAET TAQLQAEFQE VLARTRTDFE RAEQAANTKV VSLQAVLASR 360 EREMEDLRAR IEELQRAAAR RTGAGARLEE DDPEAAHAAG LRVRELEGKV AVLEQRHRLI 420 SEEKEQLTMQ LEAAKAEVMS LKAERRRLTN ELEDARNQVD DLERQKKKLA SELARAKKSR 480 HPTGEKVKVM VAKLEESSRE MKLTDRVFFL LQDRDADRRR SEEDRRRRQA QKERDDAAAR 540 RRSEDERRRR EQELEEVQNA GFGALWTSGK SRDARERGEL LARHQHDQET ASMIPHFLEG 600 SSFWLVTISA FVPFRFLLLV LHRQRNAAAR KKTEEEDAEE ARQRAAAAAA AALQDLGDET 660 PWLSVADKEK WLREHPYAPV PEKPMALAKH PHDPMLFPDT RTDITQHFDE ALAEELRKFG 720 ITAGTKGMSD EAYAEATAIL EQRRTVRLAE APAAERKQME YERGTIQWHI ERAVHARDEA 780 AVERRLRSSL NEEDEPEELT FEEATGGTRG GANRGNEYRE ASSAVVKHVI GNPASLRSSL 840 RTDYTASEVS AGSEPDASPD GRRPKNMEHD KRAKSEASAS DSSASDDVSM DSDISVHDDV 900 ASEEASEEMS EPEVYSKPSS RRSSRRPSNT NSDKTRGARE EEARGKKEEG GAWATAKPAT 960 VSRVETRNYE ESDEERSPTV QEKGVSSVEV KRKEVVLNAA EGRVADSEAV HVVQLVPSRK 1020 AQEPVPPPVQ TVKIGAAFSD GNRGGALESR RALSPLRPSS AKGSLGGRPR TEGAHFRGSE 1080 LESLESMTSV YTSDEEATSR LQGSSGRYES PAGSGPAKSS TGATSKEQKP VTKTAPRDYL 1140 DDFETDDIEE INI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 545 | 550 | ERRRRE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1HL47 | 0.0 | A0A1Y1HL47_KLENI; Uncharacterized protein |