PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00021_0250 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | HB-other | ||||||||
Protein Properties | Length: 945aa MW: 100640 Da PI: 5.8468 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.4 | 6.9e-10 | 897 | 927 | 22 | 52 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrR 52 ++yp++e+++ LA+++gLt +qV++WF N R kfl00021_0250 897 HPYPTEETKQALAAETGLTVTQVSNWFINAR 927 79***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 10.997 | 870 | 927 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.97E-13 | 872 | 927 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 3.8E-8 | 872 | 937 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.1E-20 | 877 | 927 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 7.7E-18 | 890 | 927 | IPR008422 | Homeobox KN domain |
CDD | cd00086 | 1.15E-10 | 891 | 927 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 945 aa Download sequence Send to blast |
MVSEESLSGP VDRYRGGSQY SEGDAADSRR TSKSVVQLEI LLRETEAVRE GEADEGQERG 60 GSEGGDPPIE ESPEQNPLEE DPPEEDPPED VQREVDPPEQ GLSEAGHGRG TPVFPFDLNR 120 PYSPQAATLR KSVPFFSFPS HEKPADRPGQ AESSQAQRQS PSLELSLMPA GLSVALESGG 180 GNGNQQIGAA MRGGFSDRIN ATPGHETTFR GLVQLPVGER SRAAAFELAR ARDQPGYMLA 240 HRRAIIQGGG AFRPVPARRP ATAPARPRAS SRPWAPRPDA LHARHARGNW PEGPLPVPPW 300 LAAAFRSVRH PNPNLNPGVG RNPGQEANPG LNQQPDPSSN QNPGSNPGSN PGPNPGSNPG 360 PNPASHQGSN PGLNPGSNPG PNPGSNPGEI SGSGGQSKSN PNPNPGAGSN PKSNPNPNLN 420 PKPNPTDHPN PDSNPGEQER RPEERYRVVQ ETGMIPQMWP ELAAAFHQEA PELFGPEERY 480 PSRHSEYEPA SNQPGPTLLE LGGIPLGLTQ AGEGAQFEQR FSGRSAFRFG PESFQESQPF 540 GDTRYQRQAE MGTWPGQPDT WRLGTALEQP GQGLQGQQPS RQTQERRALE GWEAESGGRV 600 PGRFAPSRER HEFQALGGPY QGREVAGGGM ESARAPVLRR PSYPAVRGEI GVYASQPGAG 660 VSYGARGRGP GMGAGSVPGS VSVRGEVGRA GTSGRPSATD TQVPMELLRE LFPFGGGFDE 720 AQGGMADFAS RGEEMNPSQA VFVESEKGQL TTSKRGQEIG GSGGGMRRGA ERKTGRTGGT 780 AALAEETRVG QTVEATRRGW MEEEGGTGRE KRVGETGGTG GTGGLGGLGG LQDMGGFGVA 840 RERPAEERDE RERSRGKRSI EESSEEQDEA RPRKRGGNLP RPAVDRMGQW LRENFHHPYP 900 TEETKQALAA ETGLTVTQVS NWFINARGTS GYGVLQSHHR CLTSG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1HP03 | 0.0 | A0A1Y1HP03_KLENI; Homeobox protein Meis 1 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27990.1 | 2e-12 | BEL1-like homeodomain 8 |