PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00020_0360
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HB-other
Protein Properties Length: 2305aa    MW: 251645 Da    PI: 4.9534
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00020_0360genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox43.45.9e-143586354
                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54
                   ++++ t+ q e Le++F +++y+s+e+ + L++ +gLt +q+++WF  +R++
  kfl00020_0360 35 TKQRKTAAQMECLERAFDESKYLSQEQCTALSEDIGLTNSQIQMWFGHKRQR 86
                   677889********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-132084IPR009057Homeodomain-like
PROSITE profilePS5007113.5073090IPR001356Homeobox domain
SuperFamilySSF466892.95E-113289IPR009057Homeodomain-like
SMARTSM003893.7E-103294IPR001356Homeobox domain
CDDcd000865.62E-93387No hitNo description
PfamPF000462.1E-113586IPR001356Homeobox domain
PROSITE profilePS5082713.449701760IPR018501DDT domain
SMARTSM005712.2E-11701760IPR018501DDT domain
PfamPF027911.6E-11703754IPR018501DDT domain
PfamPF156122.6E-411311173IPR028942WHIM1 domain
PfamPF156133.2E-812331304IPR028941WHIM2 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2305 aa     Download sequence    Send to blast
MDQADGDFEG MPQAQEMDGE DDRPMAVEGK PKKATKQRKT AAQMECLERA FDESKYLSQE  60
QCTALSEDIG LTNSQIQMWF GHKRQRLGIT RATLDREPGP EAAANAAGFQ QDSPEDDSEG  120
EDAPIGLRRG AAKSPEDDAP RSSMSGKKRL SGNNDLGGTG ISQSGPTSKA ALEAELALLD  180
SRREALKERE RFLTNDTEGR AAPFASMGPP PDKPERKKPG PKATAVKSAV MTAATAAEAG  240
RSGRVVAAIA LVERNIEGGI RQDGPPLGVR FDPVPKDPWV GFQKRKAGQK GEAEEAEEEP  300
VKKVAKVLKV APRNDRPALR PLAPRPPAPQ PPPLQNPPPP TLQHPRPPIL QHQHPSMAYP  360
IHHGNLPSDQ AYAHPMSQAG FPHGSAMFQG PVQGQPYFGQ PPIVQGIPVG RPPDYPDQEE  420
EHDEELELLR RQAAAAAAAL ATSTALLRAA EQKRRNAAGG GAKRVLQGED VEAYNAEKRR  480
KSEEGLLSKE EERRRLFLKR ELERQALAEK KQEEAMRREA LKRRILEQRE HARLQKERAR  540
ESEREEREKK REEERKEKEK AREEARVEKE RIKEAAKEAS RKAREEQRAR VLRAREVAKR  600
AARQASELME DELCELQAAA KAQGLDVRMQ FEYCSDDDVS EDVLYAEKIA EQNERRDLKL  660
RKQAREGESG GYEVSVAMHE FPPRNVEMKP VLTGEPWDES CEATGNLLMA WSFVTSFSEQ  720
LGLWPFTPEE LANALDDFDS RLLGEVHIGL LRVVAADIRA FQERAEAEAA SYPVPEGGLP  780
PLVPVHPLVE HAAKWGFDVK QWWRDLNALT WPELLRQWAI CAGLGPKYAD KKESFEDESD  840
GENGAELLRS GAAVEAAIAQ IDGRKARASK AGRSQKRGRH QGKPYKPLTV GTVKYAVFHV  900
LSEAGPAGLT IKEIVAQIKE AGLKDLSEHK SADFTIVSAL RDSCFSRVGG VVGTNRYRLV  960
AAYRRSASTM LQRALGDVEE ADEEEGEEEG EECEPGTEAE VALSEGTAAD LEEVGVPAAE  1020
ELEADGVKKG ESDELLGGKV QSETVRKDAL SRVHEGPQLE GEGGEVKSRK EGPELQDQSK  1080
EDAKLENGAG IGVETKVQSL DCDEEEEGSE EEDEEDLEEE EETLGEVVNE GAPFVQALLR  1140
SDYSSLSVAE RLEALGALVN AVNDTEIIRE ALEERFEVTA ALRRQMWAER KKQQNGGEVN  1200
VGEAGKKEEP IQSRSQRGEL LRKCEEENAI RGLEIGRDRR HNRYFLFEPS GASDAGPYTG  1260
RIYFQSAEDW HWESIDSEAG LEALLGCLDA RGRREAALLE SLRRLGPRIR TGMRKNGRGL  1320
PPRLAVAGSA ERGMRGGSGQ FLRQGGGMQP LTRPVLQIPP QSRTEGPQAG GAQPTPQRQG  1380
SAGEAEQRRA ESLQGSRELR SPVTASPSAF SPFGGGLRFQ SPAVDGPPSF QQHHSAFSSR  1440
RDSPGSERLP TESPFQPAQQ TQARQPDWQS LPERQISSPQ DRMPVEHAFQ GPTTSSLPAP  1500
PSVHSPFRAA EAHAHHSAPH NEENKHQTGP SKPSSPFEAK FSQMQPGPRS WPLAVDAAGQ  1560
STRPVPVSQG SFAENRSPQI LTAQSLARPI PMSQGPFLEN RSAQPLPLQG PFAENRSPQP  1620
PPAHFSGPAN PLPEEPLHAQ VARAQYEELE RLNRFLSNVG GPALPSGRPS SAFRPTLASP  1680
PLRSPTANWP HQQPFFGGPQ PLPAGRFSFP PSGAPYGAMQ SPGAVVLHPQ VLSAGRQSQA  1740
FGGVAEPYFY HSGPVATTPI EPPTVFLRVL GNPPQGPEGG ALGPSRKLQK REGAEGALSL  1800
QRQGSEVLAR FEEAEKYLWD VKTRAGKILD EETGLSEKLH RCEYCQEVLR PKEERHCEFC  1860
HVTHEHTAIS LEAWTQHLEQ CEEKVKAGDP DWPRFAPLER PTPRIQKIKA ELMDVEATIP  1920
AEYVDNVWME QNRDRWANQV KRAATPLDLL EALAEIEGVV MRSSGGLAPS FETTSEILSR  1980
GAPNRGSAAL PGEKSGPSVL PWLPRTTAAV ALRLLAFDGA LLYDKENDLR SLVGQGDGKK  2040
ENLFGGWELP ASLLLSVPPA GAEHVPGPGQ PSGKLPGMAS KKVSPLLGKK RIGRPPGSGL  2100
KRGDLGGARN SRTDRGGQRG GEGSRGRGRG RGRGRGGGRG RGPGRGAGKE LDREADELAA  2160
VPVERGKRGS GRGGLADMRE DETLGRGQRK KVPTWVVESG AGEVPPAAGG EDWVIDDESE  2220
EEGGEQRETS ARPDSEEKEK EEGESEEEMD EEEASDSGAK EEVDEEGESE DGEAGEEESE  2280
EEEEDEEEDG GDSEADEPDP EPSTR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
121242134RGRGRGRGRGR
221302139RGRGRGGGRG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HK010.0A0A1Y1HK01_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP15771634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44180.24e-51Homeodomain-like transcriptional regulator