PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00019_0230
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family E2F/DP
Protein Properties Length: 458aa    MW: 49409.4 Da    PI: 8.7908
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00019_0230genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP80.31.7e-25162243271
        E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     +k+Lr+++ k   ++ek+ee g++t+neva+eLv e               d+kn+rRR+YD+lNVL+al++i k +k+ei+w+g
  kfl00019_0230 162 ASKGLRHFSLK---VCEKVEEkGRTTYNEVADELVREiaeagamnspsdqsyDEKNIRRRVYDALNVLMALDIIVK-DKKEIHWRG 243
                    679********...******99******************************************************.*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.2E-42157247IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013721.4E-32161243IPR003316E2F/DP family, winged-helix DNA-binding domain
PfamPF023192.9E-24163243IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467852.18E-20164244IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM011385.8E-30250386IPR014889Transcription factor DP, C-terminal
CDDcd144587.11E-25251351IPR014889Transcription factor DP, C-terminal
SuperFamilySSF1440741.49E-26251361No hitNo description
PfamPF087812.4E-26251366IPR014889Transcription factor DP, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042023Biological ProcessDNA endoreduplication
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MESPAKRSNP PQPRSGGPNG GPPSGGGMLQ DLQREFYEQG LEGVAAGFGL IKEDPGSARK  60
RPSGNRPVIH YMGNPQNAPP GSIPMFGPPP DAAYAQYPPR EYGSPVKQDG RLPLPPGGVR  120
VAPSPAPRMS FREIVSRDQQ QGADAADRRG ARRGGSRGGD KASKGLRHFS LKVCEKVEEK  180
GRTTYNEVAD ELVREIAEAG AMNSPSDQSY DEKNIRRRVY DALNVLMALD IIVKDKKEIH  240
WRGLPSAAVA DIGMLKDEKS RVEEQMAKKQ RYLGSLHQQF GSYENLVMQN QRLHGQGEGP  300
GEGIAFPFVL IKTKPQATVE VEISEDMQLV HFDFNDTPYK MLDHDAILEL MGLVNRPSDG  360
AAEADEPQEL AAAPPAGPSA GDRANGTAVP HLESGAPSPR APQQEQVRLP PPNPAQSYQP  420
VRQEAAPPNG IRKGARGGGR GQGRRLLPEG VAAPQNGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1cf7_B3e-34156246291PROTEIN (TRANSCRIPTION FACTOR DP-2)
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021762838.15e-85transcription factor-like protein DPB
RefseqXP_021762839.15e-85transcription factor-like protein DPB
RefseqXP_021762840.15e-85transcription factor-like protein DPB
TrEMBLA0A1Y1HJS80.0A0A1Y1HJS8_KLENI; Transcription factor DP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25111734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.18e-75Transcription factor DP