PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00015_0430 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | C3H | ||||||||
Protein Properties | Length: 91aa MW: 9495.72 Da PI: 5.7707 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18 | 5e-06 | 73 | 91 | 1 | 20 |
--S---SGGGGTS--TTTTT CS zf-CCCH 1 yktelCrffartGtCkyGdr 20 +kt+ C f++ G C +Gd+ kfl00015_0430 73 FKTRMCEKFMQ-GACTFGDK 91 79*********.******96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.1000.10 | 8.6E-7 | 70 | 91 | IPR000571 | Zinc finger, CCCH-type |
PROSITE profile | PS50103 | 10.587 | 72 | 91 | IPR000571 | Zinc finger, CCCH-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence Send to blast |
MDTILHGDLN GGFNLEVTLK PSPADPNNLK DVDIEGTGAA VQSAASLIQR TLADKLNNPG 60 GSRPGAGAAS PFFKTRMCEK FMQGACTFGD K |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1HN32 | 2e-46 | A0A1Y1HN32_KLENI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1026 | 17 | 56 |