PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00015_0330

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

CPP

Protein Properties

Length: 1368aa MW: 144431 Da PI: 8.6656

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00015_0330	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42	1.8e-13	1243	1281	3	42
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 + +C+CkkskClk+YC+Cfaag++Cs C C +C N+ee+ kfl00015_0330 1243 CLRCKCKKSKCLKLYCDCFAAGVYCSG-CLCVNCLNTEEN 1281 679**********************.*******986 PP
2	TCR	46.4	8e-15	1319	1353	5	39
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 gC+C+ks+C+k+YC Cf+ag+ C++eC+C +C N+ kfl00015_0330 1319 GCHCRKSQCQKEYCVCFQAGVPCTKECTCLECLND 1353 8*********************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	1.5E-14	1241	1281	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	24.314	1242	1355	IPR005172	CRC domain
Pfam	PF03638	7.7E-10	1245	1279	IPR005172	CRC domain
SMART	SM01114	2.1E-8	1314	1356	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	7.5E-11	1319	1353	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 1368 aa Download sequence Send to blast
MDGPSIQSEP QKVLPPKSRL PSLTRSPSSS RAYPPPPVCA PVTELSPQSK DSLLQTQASL 60 GAWLEGRVHT LQECVHTLQR ELCTSDEERR RLLALNAELL RDAQVRDQLC KVQGRELWRL 120 RQILTGVLPN LSLDPPPGTV KETRLHWGET GREGQGSVRG MLESAERRMQ KAGGNVQQKG 180 PESGLIRLQE QGLVRYDEPF KLSPVPLERT SPAIVWKSSE SRAPERRHWV GMAGRGCEAG 240 AIKPPEKLSE CSEQGKLEQG EMGASAERGV LRRSVVVEGA VGKVCSESGC SKDCQAEVSL 300 PQQTPSVIGA SSKGADLEGG EPSLCPASEK HPPGTESSPV AGAKQSNPAE STEDPVASVA 360 EPQGNAGSVP PGSLLGSVDA DSMLAGRLAP SSGRRSSGIA PDMVFAMMQL AEGGQAILSP 420 LGKEGLLQAT RGRNEESGGD RRGNKGAGQT TRGGEKETAD AEKVPRAWEG REKEGQGGEL 480 RTRITEETGE QGKALDSGRK NTEDREEKIG GEEKRAAAME QGSSDWAHEV CDVKNGRSGE 540 HEELGAGRQR TRGAPEDSAG GAAEGALSAE PEKAPGQEKG DDAEREAKLL DHDAEQVSNP 600 VLETWKDEAE GGSQAICKES AVVAQVTESF CAIFAPSQEP VVTSVSGLVP NADAQESPSD 660 SLTRSFKASK TALGEDTTAQ PSHPGSALEA DLEPLSEKGH ERFTRESDAR QPSDLPIVRR 720 KRTKRPLSGV RKKARTAASA FLHVSPKSSN SGSQRLGDRG RLGDPSAPLA KPALHTLPSN 780 LDRTASKLSM DALAKAAALV ERGGLASPEA GGGTAVETAK RAREEAETGG EGSSGSGDEL 840 PISKMGRTGK GGEVTRGKQR ERHVASSVSV PKNAPAGVCG QGAGPKLRVP EVPRRLSTGL 900 SGFTKLPTGP SLIRSAGLSE RPGASNRAKL TAGKTLPNQP GVGNPLTPNP AVKRWSEPGD 960 SHWSCGKTQL LGAKPGVSKP GELTRRTDWA NVGVPSMNVV GRAGPGASHN LPHRLVQRPG 1020 GNGHVPEIAD SAKASAEKMV ISVEEAKRNG ALPQKQPREV PPEKQQPALG TAGSQSGGAP 1080 KPSQPAGFHP PETGTPKIRS AVALHRPPEA RYRGPDVSST SGAFRAFASG QPNRMRPTAF 1140 PDVQPPASAP GGTKSASGLM RKGLEDFSRL VAQRPGGSFS AQDGGGPDAA PNPQMVQFWR 1200 RQEVLAKNMR LLAENDRGSV GSVAKSDGHS CPAGKKEKDA AKCLRCKCKK SKCLKLYCDC 1260 FAAGVYCSGC LCVNCLNTEE NAAIVNERKA AIIRKEPNAF RIVEDRSVGL AVQRHVRGGC 1320 HCRKSQCQKE YCVCFQAGVP CTKECTCLEC LNDVPRLVVR SEAQPQRA

Sequence ? help Back to Top

Protein Sequence Length: 1368 aa Download sequence Send to blast

MDGPSIQSEP QKVLPPKSRL PSLTRSPSSS RAYPPPPVCA PVTELSPQSK DSLLQTQASL  60
GAWLEGRVHT LQECVHTLQR ELCTSDEERR RLLALNAELL RDAQVRDQLC KVQGRELWRL  120
RQILTGVLPN LSLDPPPGTV KETRLHWGET GREGQGSVRG MLESAERRMQ KAGGNVQQKG  180
PESGLIRLQE QGLVRYDEPF KLSPVPLERT SPAIVWKSSE SRAPERRHWV GMAGRGCEAG  240
AIKPPEKLSE CSEQGKLEQG EMGASAERGV LRRSVVVEGA VGKVCSESGC SKDCQAEVSL  300
PQQTPSVIGA SSKGADLEGG EPSLCPASEK HPPGTESSPV AGAKQSNPAE STEDPVASVA  360
EPQGNAGSVP PGSLLGSVDA DSMLAGRLAP SSGRRSSGIA PDMVFAMMQL AEGGQAILSP  420
LGKEGLLQAT RGRNEESGGD RRGNKGAGQT TRGGEKETAD AEKVPRAWEG REKEGQGGEL  480
RTRITEETGE QGKALDSGRK NTEDREEKIG GEEKRAAAME QGSSDWAHEV CDVKNGRSGE  540
HEELGAGRQR TRGAPEDSAG GAAEGALSAE PEKAPGQEKG DDAEREAKLL DHDAEQVSNP  600
VLETWKDEAE GGSQAICKES AVVAQVTESF CAIFAPSQEP VVTSVSGLVP NADAQESPSD  660
SLTRSFKASK TALGEDTTAQ PSHPGSALEA DLEPLSEKGH ERFTRESDAR QPSDLPIVRR  720
KRTKRPLSGV RKKARTAASA FLHVSPKSSN SGSQRLGDRG RLGDPSAPLA KPALHTLPSN  780
LDRTASKLSM DALAKAAALV ERGGLASPEA GGGTAVETAK RAREEAETGG EGSSGSGDEL  840
PISKMGRTGK GGEVTRGKQR ERHVASSVSV PKNAPAGVCG QGAGPKLRVP EVPRRLSTGL  900
SGFTKLPTGP SLIRSAGLSE RPGASNRAKL TAGKTLPNQP GVGNPLTPNP AVKRWSEPGD  960
SHWSCGKTQL LGAKPGVSKP GELTRRTDWA NVGVPSMNVV GRAGPGASHN LPHRLVQRPG  1020
GNGHVPEIAD SAKASAEKMV ISVEEAKRNG ALPQKQPREV PPEKQQPALG TAGSQSGGAP  1080
KPSQPAGFHP PETGTPKIRS AVALHRPPEA RYRGPDVSST SGAFRAFASG QPNRMRPTAF  1140
PDVQPPASAP GGTKSASGLM RKGLEDFSRL VAQRPGGSFS AQDGGGPDAA PNPQMVQFWR  1200
RQEVLAKNMR LLAENDRGSV GSVAKSDGHS CPAGKKEKDA AKCLRCKCKK SKCLKLYCDC  1260
FAAGVYCSGC LCVNCLNTEE NAAIVNERKA AIIRKEPNAF RIVEDRSVGL AVQRHVRGGC  1320
HCRKSQCQKE YCVCFQAGVP CTKECTCLEC LNDVPRLVVR SEAQPQRA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5fd3_A	2e-13	1246	1352	14	120	Protein lin-54 homolog
5fd3_B	2e-13	1246	1352	14	120	Protein lin-54 homolog

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	719	732	RKRTKRPLSGVRKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HN22	0.0	A0A1Y1HN22_KLENI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	3e-19	Tesmin/TSO1-like CXC domain-containing protein