PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00012_0370

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

bHLH

Protein Properties

Length: 568aa MW: 61236.1 Da PI: 9.3376

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00012_0370	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.3	1.4e-08	434	478	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er RR+ri +++eLr l+P++ +K ++L k veY+k Lq kfl00012_0370 434 SVSERERRERIAARMDELRALVPQR-----MAFDKTSMLAKIVEYVKFLQ 478 578*******************8.....579**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.601	428	477	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.5E-12	432	489	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.5E-13	432	486	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.4E-6	434	478	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-8	434	483	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence Send to blast
MSEPSKSSSQ QLSPREPPVT TTPLSTNEIN NLFEELKGVL YSNEDPAFLT ALDQYKHDLR 60 KSYVKGVREI FEQGRPLSFS PRLKQPPRQG AQQGGHLQQA NFAPPEDFTF QIEQSAQQDP 120 GGQTLLGTDD PVLTQLLFSP PPTHGGETPA RAPPRSSISV GGTQTRLSFQ YPFPPSPRPE 180 EEQSEVPELS PTFLSLMSAA ESVGKNATPT STSAQFLFPR GVGAAAESGI TDASEASQSA 240 SGLRPPGVRS QGAPRGVQRR GLLEKTLSEN LERLHHGLSG GTSLSQPATP QTFQKEPLFA 300 ERTPFEFVFP AESTRGRPAA AEDRPAKKQR RSALPSLEAE DSPQTRYVSL LTEPDTEQFT 360 LPGLEALGCL PRSVTPAFRH SVNTPGAEAT SPGFPSESQA AQRATRTEGA KPAMVAPIPI 420 KMRAKRGCAT ERRSVSERER RERIAARMDE LRALVPQRMA FDKTSMLAKI VEYVKFLQMQ 480 VQLLRMGANG APAADVGLPG GLPEVAKGLA SRLPHPGQDP GVATGLLHLL KTAPGEAVQF 540 LHDRGLCLVP TSVAATRFAP RGQLPRGI

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence Send to blast

MSEPSKSSSQ QLSPREPPVT TTPLSTNEIN NLFEELKGVL YSNEDPAFLT ALDQYKHDLR  60
KSYVKGVREI FEQGRPLSFS PRLKQPPRQG AQQGGHLQQA NFAPPEDFTF QIEQSAQQDP  120
GGQTLLGTDD PVLTQLLFSP PPTHGGETPA RAPPRSSISV GGTQTRLSFQ YPFPPSPRPE  180
EEQSEVPELS PTFLSLMSAA ESVGKNATPT STSAQFLFPR GVGAAAESGI TDASEASQSA  240
SGLRPPGVRS QGAPRGVQRR GLLEKTLSEN LERLHHGLSG GTSLSQPATP QTFQKEPLFA  300
ERTPFEFVFP AESTRGRPAA AEDRPAKKQR RSALPSLEAE DSPQTRYVSL LTEPDTEQFT  360
LPGLEALGCL PRSVTPAFRH SVNTPGAEAT SPGFPSESQA AQRATRTEGA KPAMVAPIPI  420
KMRAKRGCAT ERRSVSERER RERIAARMDE LRALVPQRMA FDKTSMLAKI VEYVKFLQMQ  480
VQLLRMGANG APAADVGLPG GLPEVAKGLA SRLPHPGQDP GVATGLLHLL KTAPGEAVQF  540
LHDRGLCLVP TSVAATRFAP RGQLPRGI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HL72	0.0	A0A1Y1HL72_KLENI; Basic helix-loop-helix family protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	2e-18	LJRHL1-like 2